Gossypium raimondii: 105776096
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Entry
105776096 CDS
T04129
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic isoform X2
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105776096
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105776096
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105776096
Membrane trafficking [BR:
gra04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
105776096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
105776096
NCBI-ProteinID:
XP_012454025
UniProt:
A0A0D2UM81
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All DBs
Position
10:357927..368432
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AA seq
991 aa
AA seq
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MDLQPSPSGRSSTVGRTSSFSVADSGGQTLSSVLNNPHAGKLEASWGWWSVAPPEFTPLT
STKAACDLTRSDFQSYVSSISDSYYRFEDIRNHTTKEQTLDVDNIGEALVACLREVPALY
FKEDFALEDGGTFRAACPFTDVSENIILQEKLSHYLDVVELHLVKEISLRSNSFFEAQGQ
LQDLNVKIVEGCNRIRDLKETIRLVDTDLVDSARQIQELNASRTNLLALQHKLKLILSVN
QALSALKLLVASSECAGALDIIDDLQHLLDGDELSGLHCFRHLRDHVVTSIDSINSILSA
EFMRASIHDKGDKDSVILLKAKARASISLNGEDVGVNLDEEETTNFRDRLLPLIIGLLRT
AKLPFVLRTYRDTLTADMKTAIKTAVAELLPVLVGQPLESDMGAERTVDADGGGLSLASK
LRSLSSGSFVQLLAAIFKIVQAHLVRAAEVKRAIEWVMCNLDGHYAADSVAAAIALGAMV
AESSQESNGQGGALPLSASLRSTSKVLSSPGKGSDAISPSNLSKNFRADVLRENAEAVFA
ACDAAHGRWAKLLGVRALLHPKLRLQDFLSIYNITQEFITSTEKIGGRLGYSIRGTLQSQ
AKSFVDFQHESRMTKIRAVLDQETWVEVDVPDEFQAIVSSLFDSEAIVSGSKDNAESNMT
ESYSNEGSQVGSVAQNEPTDSSSTTAVNAAQGKAEVIERKKSDAVTSSQSNNSNTKERGK
NATQTLECGGVSYHMVNCGLILLKMLSEYIDMNHLLPALSLEVVHRVVEILKFFNTRTCQ
LVLGAGAMQVSGLKSITSKHLALASQVISFIYAIIPELRQILFLKVPEPRKSLLLSEFDR
VAQDYKVHRDEIHTKLVQIMRERLLVHLRGLPQIVESWNRPEEADPQPSQFARSLTKEVG
FLQRVLSRTLHEVDVQAIFRQVVVIFHSQISDAFSRLEISTPQAKDRLYRDVTHILGCIR
SLPSDNSNNSATPNWGQLDEFLAQRFGAEAS
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatctacagccttccccatcgggaaggtcatcgacagttggtcggacctcttcattt
tccgtcgccgattcgggtggccaaacgctttcttcggtccttaacaaccctcatgctggc
aaattggaagcttcttggggttggtggtcggtcgcgccgcctgaattcactcctttgacg
tccaccaaagcggcttgcgaccttacccgatccgacttccaatcatacgtctcttccatc
tccgattcctattatcgattcgaggatattaggaatcacaccaccaaggagcagactctc
gatgtcgataacattggggaagccctcgtagcttgtttaagggaggttcccgccctttat
tttaaggaagatttcgcgctcgaagatggggggaccttccgggcagcctgcccttttact
gatgtttctgaaaacattatacttcaggagaaattgtcccattacttggatgttgtggag
cttcatttggtgaaggagatttcgttgcgctccaattctttcttcgaagcgcaagggcag
ttgcaggacttgaatgttaagattgtggaaggatgcaatcggattcgtgatttgaaggaa
actattcggctcgtagacactgatttggttgactctgctaggcagattcaggagttgaat
gcctctaggaccaatttgttggctctccaacataaattgaagcttattctatctgttaac
caagccttatccgctcttaaattgcttgttgcatcttcagagtgtgctggagctttggat
attatcgatgatctgcaacacttactggatggggatgagctttctggtttacattgcttt
cgtcaccttcgagatcacgtagtcacttctatagattccataaacagtattctttcggca
gaatttatgcgtgcttcaatacatgacaagggggataaagattcagttatattgttgaaa
gcaaaagccagggcatccatttccttgaatggcgaggatgttggagttaacttggatgag
gaagaaaccaccaattttcgagatcgtcttctgcctcttattattggtttgcttcgaact
gccaagctcccatttgtcctaaggacatatcgtgatacacttactgctgatatgaaaact
gctattaagactgctgttgcagagctgcttccggttctggtgggccaacctctggaatct
gatatgggtgcagagcgcactgtcgatgcagatggtggaggcttatcacttgctagcaaa
ttaaggagtttgtcatctggaagctttgtccaacttctggctgctattttcaagattgta
caggcacatttagtccgggcagctgaagtgaaaagggccattgagtgggtaatgtgcaac
cttgatggtcattatgctgctgattcagtcgctgctgcaattgcacttggtgccatggtt
gcagaatcttctcaagagagtaacggtcaaggtggtgcacttcctctgagtgcatcttta
aggagtacatccaaggttctttcatccccagggaaaggaagtgatgcgataagcccctca
aatttatcaaagaatttcagggcggatgttctgagagaaaatgctgaagcggtctttgca
gcttgtgatgctgctcatggaagatgggcaaagctgcttggcgttcgtgctcttcttcat
cctaagctaagattgcaagactttctgagcatatataatatcactcaggagtttataact
tctacagagaagattggaggaaggttgggatatagcatcaggggaacactgcagtcacag
gctaaatcctttgttgatttccagcatgaatctcgaatgacaaaaatacgagcagtgctt
gatcaagagacatgggtagaagtagatgttcctgatgaatttcaggctattgtttcttca
ctgtttgattctgaagcaatagtttctggaagcaaggataatgctgaaagtaatatgaca
gaaagctacagcaatgagggttcacaagtaggttctgtggcgcagaatgaaccaactgat
tctagtagcacaactgcggtaaatgctgcccaagggaaggctgaggtgattgagagaaag
aaatctgatgcagtaacttcatctcagagtaataacagtaatacaaaggaacgtggaaaa
aatgctactcaaacacttgaatgtggcggtgttagttatcacatggttaactgtggctta
atattgctgaagatgctgtcagagtacattgacatgaatcatcttctgccagcactatcc
ttggaggtggttcatcgtgttgtggagattctaaaatttttcaacacgagaacatgccaa
cttgttttaggtgctggagccatgcaggtttctggtttgaagtccattacttctaaacac
ttggccttggcaagtcaagtcattagtttcatatatgctatcattcctgaattgaggcaa
atcctgttcctcaaagttcctgaacctcgaaagtcacttttgctgtcagagtttgatcga
gttgcacaggattataaggttcaccgggatgaaattcatacaaagcttgttcagataatg
agagagaggttgttggttcatctgcgtggactaccccagattgttgagagctggaataga
ccagaagaagctgacccacagcccagtcaatttgctaggtctctcactaaggaagttggg
ttcctccaacgagttttatctcgtacattgcatgaagtagacgttcaagcaattttcagg
caagttgttgtaatcttccattcacaaatttcagacgcattttcacgcttagagatcagc
actccccaggcaaaagatagactgtaccgcgatgttacacacattcttggatgcattcgg
tcattgccttctgataattcgaataactctgctaccccaaactgggggcaactggatgag
ttcttagcacaaaggttcggggccgaagccagttga
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