Gossypium raimondii: 105776221
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Entry
105776221 CDS
T04129
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105776221
03041 Spliceosome [BR:
gra03041
]
105776221
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
105776221
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105776221
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GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105776221
NCBI-ProteinID:
XP_012454218
UniProt:
A0A0D2UN98
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Position
10:5172392..5177441
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AA seq
421 aa
AA seq
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MQHQRLKQQQQALMQQALLQQQSLYHPGILAPPQIEPIPSGNLPPGFVPSTCRSVYVGNI
HTQVTEPLLQEVFASTGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
KVNWAYASGQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYPSCSDARVMWDQKTGRSRG
FGFVSFRNQQEAQSAINDLSGKWLGSRQIRCNWATKGASSNDDKQSSDAKSVVELTNGSS
EDGKETTNTEAPENNPQYTTVYVGNLAPEVTQLELHRHFHALGAGVIEEVRVQRDKGFGF
VRYSTHAEAALAIQMGNAQSYLCGKQIKCSWGSKPTPPGTSSNPLPPPAAPLPGFSATDL
LAYERQLAMSKMGGVHALMHPQGQHPLKQAAMGVGAAGASQAIYDGGYPNVAAAQQLMYY
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcaacagcaacaagccttgatgcaacaagctcttcttcaa
cagcagtctctctatcatcccggcatcttagctcctcctcagatagagccaattcccagt
ggaaatctgcctcctggttttgttccaagcacttgccgcagtgtgtatgtgggaaatatc
catacacaagtgactgaaccactacttcaagaggtttttgcaagtactggccctgttgaa
ggttgcaagcttgtcagaaaggaaaagtcatcgtatggattcgtccactacttcgatcgc
agatcagctgctcttgctatattgtctctaaatggaaggcatttgtttggacagcctatc
aaggtcaattgggcatatgctagtggtcagagagaggatacatcaggtcactttaacatt
tttgttggggatctcagtcctgaggttactgatgcaatgctgtttgcatgcttttcagtc
tatcccagttgttcggatgcaagggttatgtgggatcagaaaactgggcgttcaagagga
tttgggtttgtttcattccgtaaccagcaggaagcacaaagtgcaattaatgacttaagt
ggaaagtggcttggcagtcggcagattcgttgtaattgggcaacaaagggtgctagtagc
aatgatgacaagcagagctctgatgccaaaagtgtggtggaacttaccaatggctcatct
gaggatggtaaagagacaaccaatactgaggctcctgagaataatcctcaatatactact
gtttatgtgggcaatcttgctccggaggtcacccaacttgaactccatcgtcacttccat
gctcttggtgctggggtgatagaggaggttcgggtccagcgtgataaaggctttggcttt
gtgagatacagtactcatgctgaggcagctttggctattcagatggggaacgctcagtca
tatctatgtggcaagcaaataaagtgttcttggggcagcaagcctacaccaccagggaca
agctccaatccacttcccccacctgcagcaccattacccggtttttcagccactgacctt
ttagcttacgaacgacaacttgccatgagcaagatgggtggagttcatgctctaatgcac
ccacagggacagcatcctctgaagcaggcagcaatgggggtgggtgctgctggagcaagc
caggctatatatgatggtggatacccgaatgttgctgctgcccagcagctaatgtactat
cagtaa
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