Gossypium raimondii: 105776426
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Entry
105776426 CDS
T04129
Name
(RefSeq) ubiquitin C-terminal hydrolase 13
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gra
Gossypium raimondii
Pathway
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105776426
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gra01002
]
105776426
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105776426
Enzymes [BR:
gra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105776426
Peptidases and inhibitors [BR:
gra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105776426
Ubiquitin system [BR:
gra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105776426
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
CDI_Immunity_Comp
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
105776426
NCBI-ProteinID:
XP_012454521
UniProt:
A0A0D2TC48
LinkDB
All DBs
Position
10:53450268..53467255
Genome browser
AA seq
1112 aa
AA seq
DB search
MTLMTPPPLDQEDDEMLVPHNDFVDGPQPLEVAKEAASKVDAQAVDDPPSGRFTWTIENF
SRLNTKKLYSDIFFVGGYKWRILIFPKGNNVDHLSMYLDVADSATLPYGWSRYAQFSLAV
CNQIHNKYTIRKDTQHQFNVRESDWGFTSFMPLGELYDPSRGFLVNDTCVVEADVAVRKV
ADYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSIPL
ALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEG
TIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVECLEGDNR
YHAEQFGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDG
KYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDVKRA
LEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRI
RLKKEQEEKEQKRKEKAEAHLYTVIKVARNEDLVEQIGRDIYFDLVDHEKVRSFRIQKQM
PFNVFKEEVAKEFGIPVQYQRFWLWAKRQNHTYRPNRPLTYQEEAQSVGQLREVSNKANN
AELKLFLEVELGPDLQPVPPPEKTKEDILLFFKLYDPVKEELRYIGRMFVKGAGKPMEIL
ARINKMAGFGPDEEIELYEEIKFEPNVMCEHIDKKLTFRTSQLEDGDIICLQKYSEVASE
QCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFSLELSKLHNYDDVVERVAHHLGLDDPS
KIRLTSHNCYSQQPKPQPIKYRGVEHLSDMLIHYNQTSDILYYEVLDIPLPELQGLKTLK
VAFHHATKDEVVIHTIRLPKQSTVGDVLDDLKTKVELSHPGAELRLLEVFYHKIYKIFPL
SEKIENINDQYWTLRAEEIPEEEKDLGPHDRLIHVYHFMKDTTQNQQVQNFGEPFFLVIH
ETETLAEVKVRVQKRLQVPDEEFAKWKFAFLSLGRPEYLQDSDVVSTRFQRRDVYGAWDQ
YLGLEHSDNAPKRSYAANQNRHTFEKPVKIYN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactcctccaccgttagatcaggaggacgatgagatgttggtcccccac
aatgacttcgtcgacggtcctcagcctttagaagtggcgaaggaagctgcaagtaaagtg
gatgcacaagcagtggatgatccaccgtcaggaaggttcacatggacaattgagaatttc
tcgaggcttaatactaagaagctctactctgacatcttctttgttggaggctacaaatgg
cggatacttattttccccaagggtaacaatgttgatcatttgtcaatgtatcttgatgtt
gcggattcagcaactttaccctatggatggagtagatatgcacagttcagcttagctgtc
tgcaaccaaatacataataagtatactattagaaaagacactcagcatcagttcaatgta
cgtgaaagtgattggggcttcacttcattcatgcctcttggtgaactatatgaccctagt
agaggctttcttgtgaatgacacatgtgtcgtagaagctgatgttgctgtgcgtaaggtt
gctgattattggtcacatgactcaaaaaaggagactggttatgtcggactcaagaatcag
ggagccacctgctatatgaactctctcctccaaacactctatcatattccctacttcaga
aaggctgtgtatcatatgccaacaactgagaatgacatgcccacagggagcattccattg
gctttgcagagtctattttataagctccagtatagtgacactagtgtggcaaccaaggag
ttgacgaaatcttttgggtgggacacttatgattctttcatgcagcacgatgttcaggaa
cttaatagggttctttgtgaaaagcttgaagacaaaatgaagggaacagttgtggagggt
acaatacaacagttgtttgaagggcatcatatgaattatattgaatgcatcaatgtggac
tataagtcaacaagaaaggaatcattttatgatcttcagcttgatgtgaaaggctgtaag
gatgtttatgcatcttttgacaaatatgttgaagtggagtgtcttgaaggtgacaatagg
tatcatgctgaacaatttggtttacaggatgccaggaaaggagttcttttcattgacttt
cctcctgtccttcaacttcagctaaaacgttttgagtatgatttcatgcgggatactatg
gtgaagataaatgatcgctatgagttccccttgcaacttgacctagatagggaggatggc
aagtatttatcacctgaggctgacagaagcgttcgcaacctttatacccttcacagtgtt
ttggttcacagtggtggggtgcatggtgggcattactatgcttatatcaggccaaccctc
tcagatcagtggttcaagtttgatgatgaacgggtaacaaaagaagatgttaagagggca
ttggaggagcagtatggtggtgaagaagagttaccgcagacaaatcctgggttcaacaac
actccatttaaatttactaaatattcaaatgcatatatgcttgtgtatatacgagaaagt
gacaaggacaaaataatctgtaatgtggatgagaaggacattgctgaacacctgagaata
agattgaagaaagagcaagaagagaaggagcaaaagaggaaggaaaaagcagaggcacat
ctgtatactgttataaaggttgcacgtaatgaagacctagttgagcagattggaagggat
atatactttgatctggtggatcatgaaaaagttcgtagctttcgaattcagaagcagatg
ccttttaatgttttcaaggaagaagttgctaaagagtttggtattcctgtgcaatatcaa
cgtttttggttgtgggcaaagcggcagaaccatacataccgtccaaatcgaccattaact
tatcaggaggaagcacaatctgtaggacaacttagagaggtttcaaataaggcgaataat
gcagagctgaagttgttcctggaagtggagcttggaccggatttgcagccagtacctcca
cctgagaagactaaagaagatattcttcttttctttaaactctatgacccagtcaaagag
gagctccgttatattgggaggatgtttgtgaagggtgctggcaagccaatggaaatattg
gcaaggatcaacaaaatggcaggctttggtcctgatgaagagattgaactttatgaggaa
ataaaatttgaacccaatgtcatgtgtgaacacattgacaagaagctcacattccgtacc
agtcagcttgaagatggtgatattatatgccttcaaaaatattctgaagttgcaagcgaa
caatgccgttatcctgatgttccttcatttctggagtatgtacataatcgtcaggttgtt
cggtttagatctctagaaaagccaaaggaggatgaattttctcttgagttgtcaaagctt
cacaattatgatgatgttgttgaaagggtggctcaccatcttggcttggatgatccttcc
aaaattaggcttacatcccataactgttattcccagcaacctaaacctcaacctatcaag
tacagaggagtcgaacatttgtctgacatgcttattcactacaatcagacatctgatatt
ctatattatgaagtgttggatatacctttgccagaactccagggcctcaaaacattgaaa
gttgctttccatcatgctaccaaagacgaagtagttattcatactattagattgccaaaa
cagagcactgtaggggatgttcttgatgacctcaagacaaaggtggagttgtctcatcct
ggtgctgaacttagattacttgaggttttctatcacaagatttacaagatcttccctctc
agtgaaaagatagagaacataaatgatcaatattggacattacgtgcagaggagataccg
gaagaggagaaagaccttggtccccatgatcgcttgattcatgtttaccatttcatgaaa
gacacaacacaaaaccagcaggtacagaattttggggagccatttttccttgttattcat
gaaactgaaacattagctgaagttaaagtgcgagttcagaaaagattacaggttccagat
gaggaatttgcaaagtggaagtttgcatttttatcactgggtcgtccagagtatcttcag
gactctgatgttgtgtctactcgttttcagagaagggatgtatatggtgcttgggaccag
tatcttggactggaacattctgacaatgcccctaagcggtcatatgcagcaaatcagaac
cggcatacatttgagaagccagtaaaaatctacaactag
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integrated database retrieval system
