Gossypium raimondii: 105776475
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Entry
105776475 CDS
T04129
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105776475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105776475
03036 Chromosome and associated proteins [BR:
gra03036
]
105776475
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
105776475
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
105776475
RSF complex
105776475
WICH complex
105776475
B-WICH complex
105776475
NORC complex
105776475
BRF complex
105776475
NuRF complex (fruit fly)
105776475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
Myb_DNA-binding
HAND
DEAD
HDA2-3
DBINO
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
105776475
NCBI-ProteinID:
XP_012454591
UniProt:
A0A0D2TA54
LinkDB
All DBs
Position
10:44013785..44020281
Genome browser
AA seq
1060 aa
AA seq
DB search
MAKSSKPASSDEPLSNGSDSSEDERINDRMEEDDDDDEELEAVARSDAASDEDDEPVPEE
IADEDESNGDDPEVSKREKERLKEMQKLKKQKVQEILDAQNAAIDADMNNRGKGRLKYLL
QQTELFAHFAKGDQSSSQKKVKGRGRHASKVTEEEEDEECLKEEEDGLSGNTRLVTQPSC
IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLMGYLHEYRGITGPHMVV
APKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRYIREELLVAGKFDVCVTSFEMAIKEKS
TLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNFLL
PEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVG
MSQMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDH
LITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFRGYLYCRIDGNTGGED
RDASIESFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIG
QKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFGAE
MVFSSKDSTITDEDIDRIIAKGEAATAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKDE
NKFDLKKIVSENWIEPPKRERKRNYSESEYFKQTMRQSAPAKPKEPRIPRMPQLHDFQFF
NTQRLSELYEKEVRYLMQTHQKNQVKDTIDVDEPEVGGDPLTAEELEEKERLLEEGFSSW
SRRDFNTFIRACEKYGRNDIKSIASEMEGKTDQEVERYAKVFKERFKELNDYDRIIKNIE
RGEARISRKDEIMKAIGKKLDRYKNPWLEMKIQYGQNKGKLYNEECDRFMVCMVHKLGYG
NWEELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQECDERERQARKEKKL
AKNITPSKRGGRQPTESPTQQKKRKQLSMDDYANSGKKRK
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaatcgtcgaagccggcgtcgtctgatgaacccctatccaacggctccgattct
tctgaagatgagcgaatcaacgaccggatggaggaagacgacgacgacgacgaagagctc
gaagccgttgcacgctccgacgccgcttccgacgaagacgatgaacccgtccctgaagaa
atcgccgatgaggacgagtctaacggtgatgatccagaagttagtaagcgtgaaaaggaa
aggttaaaagaaatgcagaagctaaagaagcagaaggttcaggaaatattggacgctcag
aatgctgccattgatgctgatatgaataatagggggaaggggcgtttgaagtatcttttg
cagcaaacagagttgtttgctcattttgctaaaggtgaccaatcttcatcacaaaaaaag
gtgaaaggaaggggccgtcatgcttcaaaagtaactgaagaggaagaagatgaagagtgt
ttgaaggaggaagaagatggtttgtctggaaatacacgattggtgactcagccttcttgt
attcagggaaagatgagggactaccaacttgctggtttaaattggcttatacgactgtat
gagaatggtatcaacggaattctagcagatgaaatgggattgggaaaaactttgcaaacc
atctccttaatgggctatctgcatgaataccgcgggattactggccctcatatggttgtt
gctccaaaatcaactcttggtaactggatgaatgaaattcgtcggttttgcccagtcttg
cgagctgtaaagtttcttgggaatcctgaggaacggagatacatccgtgaggagttactg
gttgctgggaagtttgatgtctgtgtcacaagttttgaaatggccatcaaggagaagtct
accttgcgtcgttttagttggcgctatataattattgatgaagcccatcgaatcaagaat
gagaattcactcctttcaaaaacaatgagactctacaatactaattaccgtcttcttatt
acgggtactccacttcagaataatctccatgagctttggtctcttcttaactttttattg
ccagagatttttagttcagctgaaacctttgatgagtggttccagatttctggtgaaaat
gatcagcaggaagtcgttcaacaacttcacaaggttcttcgtccatttctccttcgtaga
ttgaagtcagatgttgaaaaaggtttgcctcccaagaaggaaactatcctgaaagttgga
atgtcccagatgcagaaacagtactatagggctttgttgcaaaaagatcttgaagttgtt
aatgctggtggagagcgtaagcgtcttctgaacatcgcaatgcagctgcgcaaatgctgt
aatcacccatatcttttccaaggtgctgaacctggacctccatatactacaggggaccat
cttataaccaatgccggcaaaatggttctcttggacaagttacttccaaagctgaaggaa
cgtgattctcgagttctgatattttcacagatgacaaggctgctggatattcttgaagat
tatttgatgtttcgcgggtacctgtattgccggattgatggtaacacaggtggagaagat
cgtgatgcgtccattgaatcctttaataagcctggaagtgagaaatttgttttcttgtta
tcaactagagctggaggccttggtattaaccttgctacagcagatgttgtcattctttac
gatagtgactggaacccacaagttgatttgcaagcacaagatcgtgctcataggattggt
caaaagaaagaagttcaagtgttccgcttttgcacggagtatactattgaggaaaaggtg
attgagagggcttataaaaagctcgccctagatgctctggttatccaacaaggacgatta
gcagagcagaagactgttaacaaggatgagttgcttcaaatggtgaggtttggtgctgaa
atggtcttcagttccaaggatagcacaatcactgatgaagacattgacagaatcattgcc
aaaggagaagcagcaactgctgaacttgatgccaagatgaagaaatttactgaggatgca
attaaatttaagatggatgatactgctgaattgtatgattttgatgatgataaggatgag
aacaagtttgacttaaagaaaattgtaagtgaaaactggattgaacctcctaaaagagag
cggaagcggaattactcagaatctgagtacttcaaacaaaccatgcgccagtcagctcca
gcaaaaccaaaggagcctcgtattcctcgcatgcctcaactgcatgatttccaatttttt
aacactcagaggctaagtgagttgtatgagaaagaagtacgctatctcatgcaaacacat
cagaagaatcaggtaaaggacacaattgatgtggatgaacctgaagtagggggagatcca
ttaaccgctgaagagttggaagaaaaggagagactactagaagagggattttcttcatgg
agtagaagagatttcaatactttcattagagcttgtgagaagtatggacggaatgatata
aaaagtattgcttcagaaatggaagggaaaacggatcaggaagttgaaagatatgctaaa
gtttttaaggaacgcttcaaggagttaaatgattatgataggataattaagaacattgaa
cgaggagaggccagaatttctagaaaagatgagatcatgaaagcaattggcaaaaaattg
gatcggtacaagaatccctggctggaaatgaagatccaatatggtcagaacaaagggaag
ctgtacaatgaagaatgtgatcgattcatggtatgcatggttcacaagcttggttacggg
aattgggaggagttgaaggcagcatttcgtacatcacccttgtttcgatttgattggttt
gtgaagtcgcggacgactcaagagctggctcggagatgtgataccctcatccgattggtt
gagaaggaaaaccaagaatgtgatgagagggagcgacaagcccgcaaggaaaagaaactt
gccaagaacataacaccatcaaagcgtggagggaggcagccaactgagagtcctactcaa
caaaagaaacgcaagcagctatcaatggatgattatgcgaactcgggtaaaaagaggaag
tga
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integrated database retrieval system
