Gossypium raimondii: 105776600
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Entry
105776600 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105776600
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105776600
03036 Chromosome and associated proteins [BR:
gra03036
]
105776600
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105776600
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
105776600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
HAT_Syf1_CNRKL1_C
TPR_14
Lsm_interact
HAT_Syf1_M
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
105776600
NCBI-ProteinID:
XP_012454805
UniProt:
A0A0D2VK73
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All DBs
Position
10:9555308..9566459
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AA seq
856 aa
AA seq
DB search
MKLFLAKEEGKKSEAKETRMDFEKSSVSIKDDTEMADDDTAQNPESSRKLSSDSDSSDSE
DEAEQTQQLRALESDLSTNPSNYDAHILYIKLLRRRGEIEKLREARENMNVLFPLTPAMW
VEWAKDEASLLNDSDSESVEKLYERGISEYLSIPLWREYLNYVLQHDPKVCDSSVDGISK
ARNLFERAVTAAALHVAQGSQIWDAYTQFEQSILLTIDQSDIQAKENQVQRIRSIFHRQL
SIPFANMKSTLLSYKAWEVEQGNSLDAESDNVDGISSHVASSYRKAEEMYNARAHLEEHI
TRQGISESERYQHFMSYLDFEKSFGDPARVQSLYERAITDFPVSSDLWLDYTRYLDKTLK
AGNIVKDVYSRATRKCPWVGELWVRYLLCLEHGLASEKEISAAFEKSVQCTFSTLEEYLD
LFLTRVDGLRRRLSSARGDDVLNYSLIRESFQQATDYLSPHLKNTDGLLRLHAYWACLEL
KLNNNLTAARGVWGSLLKTCGSMLEAWQGFIAMEIALGHINEARAIYKRCYSKRFSGTGS
EDICHAWLRFEREFGTLDDLDHAVQKVMPRLEELQLFRLEQESKSLTEVTNQRERPLKKT
ASEKRKLGSIAIDEQSPAKRQKSTQNQKKLHEKENTRGLKLAEANDGEEKKGKVEEQVNE
QLVKDTYSSKTRLYTDQCTAFASNLNIRAIDEDLKQFFSDVGGVTAIRILHDKFTGKSRG
LAYVDFKDEEHLAAALAKNKQMLLGKKLSITRSNPKRGKRESGALTTSEHDSNQSGIEGS
SASKESVEISKGSSVAPQVPHSRKHFESIQLKGKNTFAVPRNVKPLGWTTSKPGTKKEED
EKPKSNDEFRKMFMTS
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatttttagcgaaagaagaaggaaaaaaaagcgaagcaaaagaaactagaatg
gattttgagaaatcctcagtttccataaaagatgacactgaaatggcggacgatgacact
gctcaaaaccctgagagcagtcggaaactcagtagcgactcggactcaagcgattcagaa
gacgaagcggagcagacacagcagcttcgagctttagagtctgacctctctaccaatcct
tccaactacgacgcccatatcttgtacataaagcttttgaggagaaggggtgaaatagag
aagctacgagaagctagggaaaatatgaatgtattgtttccattgactccagcaatgtgg
gtggaatgggccaaagatgaagcttctcttctgaatgattccgattccgagtcagtcgag
aagctttacgagagaggcatctctgagtatctgtctatccccctttggcgtgagtaccta
aattatgtgctacaacatgatccaaaagtatgtgatagttcagttgacgggatttcaaag
gctagaaatctttttgagcgtgctgttactgctgctgctttacatgttgctcaaggttct
caaatatgggatgcatacactcagtttgagcaatctattttactaaccattgaccaatca
gacattcaggcaaaggagaaccaggtccagcgcattcgaagtatattccatcgtcaattg
tctattccctttgctaacatgaagtctactctcctatcctacaaggcatgggaggtggaa
caaggaaattctcttgatgcagaatccgacaatgtggatgggatttcctcccatgttgct
tcatcttaccggaaggcggaggagatgtacaatgcccgtgctcatcttgaagaacatatt
acaagacagggtatatctgagtctgaaagatatcaacattttatgagctacttagatttt
gaaaaatcctttggggatccagcacgagtccaaagtctgtatgaacgtgccataactgat
tttcctgtatcaagtgatctctggcttgattatactcgctatcttgataaaaccttaaag
gcaggcaacattgtgaaggatgtttattccagggcgacaagaaaatgcccctgggttgga
gaactttgggttcggtatttgctatgtttggagcatggtcttgcttctgagaaagagata
tctgctgcctttgagaagtccgtgcaatgcacattttcgacccttgaggagtaccttgat
ttgttcctcactcgagtggatggcctaaggcgtagactttcatcagccagaggagatgat
gttttgaactattcattgattagggaatcttttcagcaagcaacagattacttatcacca
cacttgaagaacactgatggtttattgcgtttgcatgcttattgggcctgcttagagctt
aaattgaataacaatttaactgctgctcgtggtgtttgggggagcttgcttaaaacctgt
ggttcaatgttggaagcatggcaaggttttatagcaatggaaattgctttaggccatata
aatgaagccagggccatatacaagagatgctacagcaaaagatttagtggaacaggttcg
gaggatatctgccatgcttggttgcgctttgagagggagtttggaacattggatgatctt
gaccatgctgtgcaaaaggttatgcctcgtcttgaggagctgcaattgtttaggttagag
caagaatctaaatctttaactgaagtgacaaatcaaagggagcggccccttaagaaaact
gctagtgaaaagaggaaattgggttcaatcgcaattgatgaacagtctccagctaagcgg
cagaaaagtactcaaaatcagaagaaattgcatgagaaagagaacacacgagggctgaag
ttagctgaagcaaatgatggggaagagaaaaagggcaaggttgaggaacaagtaaacgag
cagctggtgaaagacacttattctagtaaaaccagattatatacagatcagtgcactgca
tttgcatcaaatcttaacattagggcaatagatgaagatctaaagcaattctttagtgat
gttggtggagtcactgcgattcgaattctgcatgacaagttcactggaaaatcgagggga
ttggcatatgtggattttaaggatgaagaacaccttgctgcagctctagcaaagaataag
caaatgttgcttggcaagaagttgagcattacacgctccaatccaaagcgaggcaagaga
gaatctggtgctctcactacatctgaacatgatagcaatcagagtggaattgaagggagt
tctgcttctaaagaatctgttgaaatctcaaagggttcaagcgtagctccccaggtacca
cattctcgtaagcattttgagagcattcaactgaaggggaaaaatacgtttgcggtgcct
agaaatgttaaaccacttgggtggactactagcaagccaggaaccaagaaagaggaagat
gagaaaccaaaatcgaatgatgaattcagaaaaatgtttatgacaagctga
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