Gossypium raimondii: 105776681
Help
Entry
105776681 CDS
T04129
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gra
Gossypium raimondii
Pathway
gra00900
Terpenoid backbone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105776681
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105776681
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105776681
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105776681
2.5.1.29 geranylgeranyl diphosphate synthase
105776681
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105776681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
CIP2A_N
Motif
Other DBs
NCBI-GeneID:
105776681
NCBI-ProteinID:
XP_012454976
UniProt:
A0A0D2T5X0
LinkDB
All DBs
Position
10:11670798..11672475
Genome browser
AA seq
372 aa
AA seq
DB search
MASVNLGSLVQSYSIFNQASRNNSKSFPLPRSFPFIPLKNISSSTPKRRSFTSPPSISSV
LTKEDAVMEEDQDPQLPSFDFKSFMIHKGNAVNQALDSAVPLRDPIKIHEAMRYSLLAGG
KRVRPVLCLAACDLVGGKESMVMPAACALEMIHTMSLVHDDLPCMDNDDLRRGKPTNHKV
YGEDIAVLAGDALLAFSFEHIAVSTVGVTPDRIVRAIGELAKSIGAEGLAAGQVVDISSE
GLTNVGLDHLEFIHVHKTAALLEAAAVLGAILGGGRDEDVEKLRKFARNIGLLFQVVDDI
LDVTKSSKELGKTAGKDLVADKVTYPKLMGINKSKEFAEKLKSDALELLQGFDPEKSAPL
IALANYIAYRQN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtgaatctgggctctttggttcaatcatactccattttcaaccaagcttcc
agaaacaattccaagtcttttcctttacccagatcctttcccttcattcccctcaagaat
atctcatcttcaactcccaaaagacgtagctttacatctcctccttcgatatcctcagtc
cttaccaaagaagacgcggtcatggaagaagaccaagaccctcaattaccaagttttgat
ttcaaatcattcatgatacacaagggtaatgcagttaaccaagccctggactcggctgtt
ccactccgtgaccctattaaaatccatgaagcaatgcgttactcccttttagccggtggc
aaaagggtccgcccagttctttgtttggctgcctgtgaccttgttggtggcaaagaatcc
atggttatgccagcagcttgtgctcttgaaatgatccacaccatgtctttagtccacgat
gatcttccttgcatggacaacgatgatcttcgtagagggaaaccaactaaccacaaagtt
tatggcgaagatatagctgtgttagcaggggatgctcttttagccttttcgtttgaacat
atagctgtatccacagttggtgtcacacctgataggattgtaagagcaattggggaatta
gctaaatctattggggctgaagggttggcggctggtcaagttgtggatataagcagtgag
ggtctaaccaatgtggggttggatcatttagaattcattcatgttcataaaactgctgct
ttgcttgaagcagctgcggttttaggggctattcttggtggtggacgtgatgaagatgtg
gaaaagttgaggaaatttgcaaggaatattgggcttttatttcaagttgtggatgatatt
cttgatgtaacaaagtcatctaaagaattagggaagactgcagggaaagatttggtggct
gataaagtgacttatcctaaattgatggggataaacaaatcaaaggagtttgcagagaag
ttgaagagtgatgcattagagttgcttcaagggtttgatcctgagaaatctgccccctta
attgctttagctaattatatagcttacaggcaaaattag
DBGET
integrated database retrieval system
