Gossypium raimondii: 105776688
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Entry
105776688 CDS
T04129
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105776688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105776688
03036 Chromosome and associated proteins [BR:
gra03036
]
105776688
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105776688
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105776688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
105776688
NCBI-ProteinID:
XP_012454985
UniProt:
A0A0D2T4T8
LinkDB
All DBs
Position
10:9181360..9188614
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AA seq
1062 aa
AA seq
DB search
MASVAGTVCEIHSTASEISRRGTDVNTENSDLHVTLYKKRKISAISDFLPHVMRRIEESL
PSLHSPDYYMEPCLEDMVRMERLEPGYCSRVPDFVVGRSGYGCVKFFGKTDVRGLDLDQI
VKFHRHEVIVYEDESNKPMVGQGLNKTAEVTLKLQIENLGLEKQEVDSIVKKLRQSMRSQ
GAHFIAFDPSNGEWKFLVDHFSRFGLSEDDEEDIIMDDATGAIQDPGVMNGSGNPEIDED
MQLDTNGPLLSHSLPAHLGLDPVKMREMRMLMFPVEEEEDIEDFRGTGSNQKQAFAKEYI
KSSLHNSSQRMPNRTSPHVVRKTPVALLEYNSGTFDSSSCGTVLMTQENKGLPLKTTKRE
GFKLDIKQETPVTGSHSHNIVDAALFMGRSFRVGWGPTGILVHSGAPVGSNDGQRVLSSV
INVEKVAIDKVVRDENSKVKKELVDFAFDAPLNLHKALNYEEKEVDVGSFQLKLLKVVSN
RLELSGICRSYIDIIERQLEVPGLSSSARLVLMHQVMVWELIKVLFSERENTGQLKSMAA
DNEEDMMQDIKEGPPEVDLEALPLIRRAEFSCWLQESVCHRVQEEVSSVNDSGYLEHLFF
LLTGRQLDAAVELAASKGDVRLACLLSQAGGSTVNRSDVSRQLDIWRINGLDFNFIEKDR
IRLYELLAGNIHGALHGIKIDWKRFLGLLMWYHLPSDTALPVVFRTYQHLLDDGKAPFPV
PIYIDEGPVEENANLSRVERFDLSYYLMLLHASEESQLCSLKAMFSTFSSTHDPLDYHMI
WHQRAILEAVGAFHSNDLQALDMGLVSQLLCQEQCHWAIYVALHMPYRDDYPYLQATLIR
GILFQYCESWSSQESQRRFIEDLGIPFQWLHEAMAVYYNYIGDLPRALEHFLECENWQKA
HSIFMTSVAHALFLSAKDSEVWRIATSMENHKSEIENWDLGAGIYISFYVLRSSFQEDNN
TMAELGSLNSKNAACRDFLGCLNESSAVWGGRLHVDARVAYSKMADEICNLLLSDTSGSR
THDEQLSCYDTVFSAPIPEDLHSSHLQDAVAVFTFQLSEVLS
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttgcagggactgtgtgtgaaattcatagtacagcaagtgaaatttctaga
agggggacagacgtcaatacagaaaattctgatttacatgttacactatacaagaagaga
aagatatctgcaatttctgattttttgccacatgttatgagaaggatagaggaatcttta
cccagtttacattcccctgattattatatggagccttgcttggaagatatggtaagaatg
gaacgcttggaacctggttattgcagccgtgttccggattttgtggttggaagatctggc
tatgggtgtgtaaaattctttgggaaaactgatgttagagggttggatttagatcaaatt
gtgaaattccataggcatgaggtaattgtatatgaagatgaaagcaataagcccatggtt
ggtcaaggccttaacaaaactgccgaggtaactttgaaacttcagattgaaaatttaggc
ttggaaaagcaggaagtagatagtattgttaagaaattaagacagagtatgaggagtcaa
ggggcacacttcattgcatttgacccttctaatggtgaatggaaattcttggttgaccat
tttagcagattcgggttgagtgaagatgacgaggaagatattataatggatgacgcaaca
ggggctatacaagatcctggggtaatgaatggtagtgggaatcctgagattgatgaagac
atgcaactggatactaatggaccactgctttctcattctcttcctgcccatcttgggctg
gaccctgttaagatgagagaaatgaggatgttgatgtttcctgttgaggaagaagaggac
attgaggattttagaggaacaggttctaatcagaagcaggcctttgctaaagaatatata
aagtcctctttgcataactctagccagaggatgcccaataggactagcccacatgttgta
cggaaaacccctgttgctttgcttgagtacaactctggtacttttgattcaagctcatgt
ggaactgttctgatgacacaagaaaataagggcttgccactgaagacaacaaaaagggaa
ggtttcaagttggacatcaaacaagagacacctgtcactggaagccattctcacaatata
gttgatgcagcattgttcatgggtaggtcatttcgtgtaggttgggggccaactggcatt
cttgtgcactctggtgcacctgtaggtagtaatgatggccaaagagtattatcttctgta
atcaatgtagaaaaagtggcaattgataaggtagttagagatgaaaatagcaaagtaaag
aaagaacttgttgactttgcttttgatgctccgttgaatcttcataaagctctaaattat
gaagaaaaagaagtggatgttgggtcctttcagctgaagcttctgaaggttgtttctaat
cgcttagagctttctggcatttgtaggagctatatagacattattgagaggcagttggag
gttcctggtttatcttcttctgctcgcttggttttgatgcatcaagtgatggtgtgggaa
ttgattaaagttcttttctcagagagggaaaatactggtcaactgaaatctatggctgct
gataatgaggaagatatgatgcaagatatcaaggaaggtcctccagaagtagacctggaa
gcacttcctcttattaggagagccgagtttagttgttggctgcaagaaagtgtatgtcac
cgtgtacaagaagaagtaagctctgtgaacgattcaggttacttggaacacttattcttt
ctcttgactgggcgacaactagatgcagctgtggagctggcagcttctaaaggagatgtt
agattggcttgtttactaagccaggctggtggatcaacagttaatcgttctgatgtttca
agacagcttgatatttggagaattaatggtctggacttcaatttcatcgagaaggacagg
attcggctttatgagttgcttgctggcaatattcatggtgctttgcatggtattaagatt
gactggaagagattcctaggattgttaatgtggtatcacctaccctcagatactgctttg
cctgttgtgtttcgaacttatcagcaccttcttgatgatggaaaagctccgtttcctgtt
ccaatttatattgatgaaggaccagttgaagagaatgcaaatttgagcagagtggaaaga
tttgatctttcatactatcttatgcttctgcatgccagtgaagagagtcaactatgttct
ctgaaggcaatgtttagcaccttctcttcaacacatgatccccttgactaccatatgatc
tggcatcagcgggcaatcttggaagctgttggtgctttccattctaatgatcttcaagca
cttgacatgggacttgtatcccagttactatgtcaggagcagtgtcactgggctatctat
gtagcccttcacatgccctaccgtgatgattatccttaccttcaagctactcttattagg
ggaattctgttccaatattgtgaatcttggagttcacaagaatcacagcgccgatttatt
gaggacttgggtattccttttcagtggttgcatgaagctatggcagtttattacaattac
attggggatttgccgagggctcttgagcactttctggaatgtgaaaattggcaaaaggct
cattctattttcatgacttcagttgctcatgcattgttcttgtctgccaaggactcagag
gtatggaggattgccacgtccatggagaaccacaagtctgaaattgaaaattgggatttg
ggagctggaatatatatttcattctatgtgctaagaagttcattccaggaggataacaat
actatggctgaacttggttccctcaacagcaaaaatgcagcttgtagagactttcttggc
tgtttgaatgagtcctcagcagtttggggtggcaggttacatgttgatgctagggtggca
tattcaaagatggcggatgagatatgcaatttgttgctgtcagatacaagcggaagtcgg
acgcatgatgagcagttaagctgctatgatacggtgttcagtgctcccattccggaagac
cttcattcgagtcatttacaggatgcagttgcagttttcactttccagctttcagaagtg
ttgagctaa
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integrated database retrieval system
