Gossypium raimondii: 105776770
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Entry
105776770 CDS
T04129
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
gra
Gossypium raimondii
Pathway
gra00500
Starch and sucrose metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105776770
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gra01003
]
105776770
Enzymes [BR:
gra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
105776770
Glycosyltransferases [BR:
gra01003
]
Polysaccharide
Storage polysaccharide
105776770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
HALZ
DivIC
DUF2388
Motif
Other DBs
NCBI-GeneID:
105776770
NCBI-ProteinID:
XP_012455126
UniProt:
A0A0D2UNP8
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All DBs
Position
10:complement(3072816..3085135)
Genome browser
AA seq
1039 aa
AA seq
DB search
MSAKLSACFFSHGFSCLSNSSYKNTVDKHKNVYMRVLFLPSRQFLPAYCKMRQRNLSSNH
KRQRMSKPPERIPTSAELLPIRDEESEPENSFPNGVDVEPFVNHETSGKDDVNTVIDVEN
IAEQNSGTLSASAGDVESTSEQIINGLVLPSVTKALAINGEQLSSMQLEDLVGMIKNAER
NILVLNQARVHALEDIHKVLDEKETLQGEINILEMRLAEADARIKVASQGKIHVEFLESQ
LEMLRNELTDRGELELYENQKKFSNEELLSTHDDHSLNKEVDSLRTENLALKNDIQALKS
MISNVKNTDERMATLENECSFLGSSVKELESKLLVSQQDSPKSSTLKVEYQELWEKVENL
QQLFDTATKQADQATLVLQQNQDLRKKVYKLEKSLEEVNVLKVSSDKMQQSNELIQKKIK
LLEERLQKSDQEIYSFVQLYQESLEAFQDTLNSLKEESKKRTSDALVDDMPREFWSRLLL
TIDGWVLEKKISNSDAKLLRELVWKKDRCIRDAHIACKEKNEREVISTFLRLASSQASPG
LYIVHIAAEMAPVAKVGGLGDVVTGLGKTLQKKGHLVEIILPKYDCMQYDGIYDLRALDV
TVESYFDGKLFQNKIWVGTVEGLPVYFIEPHHPNKFFWRGQYYGEHDDFKRFSFFSRAAL
EFLLQAGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTASASELA
SCGLDAQELNRPDRMQDNTAHDSVNPVKGAIVFSNIVTTVSPTYAQEVRTAEGGKGLHST
LNSHSRKFMGILNGIDTDAWNPATDNFLKVQYSANDMQGKAENKAATRRNLGLSSADDQR
PLVGCITRLVPQKGVHLIKHAIYRTLEMGGQFVLLGSSPVLHIQREFEGIANQFQNHEHI
RLILKYDESLSHAIYAASDMFIIPSIFEPCGLTQMIAMRYGSVPIARKTGGLNDSVFDVN
EETIPNQIRNGFTFTTPDEQGINGALERAFNFYKNNKESWKQLVQKNMNIDFSWDSSASR
YEELYAKSISRARAQASNN
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaagttatcggcttgctttttcagtcatggctttagttgtttgagtaacagt
agttataaaaacactgttgataagcataagaatgtatatatgagggtgctgtttttgcct
tcgcgtcaattcctcccagcttattgtaaaatgcggcaacgtaatctcagttcaaatcat
aaaaggcaacgaatgagtaaacctcctgagcggattccaacgagtgcagagttgctgccg
attagggatgaggaatctgaacctgaaaattcttttccaaatggtgtagatgtggagcct
tttgtaaatcacgaaactagtggaaaagatgatgttaacactgtgatagatgtagagaat
attgccgaacagaattcgggcactctatctgcctctgccggagacgtggagagtaccagt
gaacagattataaacggcctcgtgctgccttctgtaacaaaagctttggccataaatgga
gagcagctctcaagtatgcaactagaggacctggtaggcatgataaaaaatgcagagaga
aatatccttgttctcaatcaagcacgggttcatgcgctagaagatattcataaagttctt
gatgagaaggagactttgcaaggagaaattaacattttggaaatgagattggcagaggct
gatgcacggattaaagttgcttctcaaggaaagatacatgtcgagttcctagaaagtcaa
ttagagatgttgcgaaatgagttaactgacaggggtgagcttgaactatatgagaatcaa
aagaaattttcgaatgaggaattgctttcaacacatgatgatcattctcttaacaaggag
gttgattcattaaggacagagaatctggccctaaaaaatgatatccaagcacttaagtct
atgattagcaatgtcaagaacactgatgaacgcatggcaacattggaaaatgaatgctct
tttctagggtcctctgtgaaggagttggagtctaaactattggtttctcagcaagactct
ccaaaaagttctactctaaaggttgaataccaggagctatgggaaaaggtagaaaatttg
caacagttgttcgatacggcaactaaacaggctgatcaagccactttagtgttacagcaa
aaccaggatcttcgaaagaaggtttataaactggaaaaatctcttgaagaggttaatgtc
cttaaggtatcatctgacaaaatgcaacaatcaaatgaactcatacagaaaaagataaaa
ctactagaggagcgtcttcaaaagtctgatcaagagatatattcttttgtccaattatat
caagaatctctggaggcatttcaggatactcttaatagtttgaaagaagaaagcaagaaa
aggacatcagatgcactagttgatgatatgcctcgagaattttggagccgcttattgctt
actattgatggttgggtgcttgagaagaaaatatcaaacagtgatgcaaagcttttgaga
gaactggtgtggaagaaggatcgatgcattcgtgatgcacatattgcatgcaaagaaaag
aatgagcgtgaagtcatatctacatttctccggcttgcatcctcacaagctagtccaggg
ttgtacatcgttcatattgccgctgagatggcaccagttgctaaggttggtggtttggga
gatgttgtgactggtcttggtaaaacactgcagaagaaaggacaccttgtagagattatt
cttccaaaatatgattgtatgcaatatgacggcatttatgacttaagggccttagatgtg
actgtagagtcatattttgatggcaaactatttcaaaataaaatttgggttggtactgtt
gaaggtcttcctgtttattttattgagcctcatcatcccaacaagttcttctggagaggt
caatattatggagagcatgatgatttcaagcgtttttcatttttcagtcgcgcggcactc
gagtttcttcttcaagctggcaagaaaccagatataattcactgccatgattggcagaca
gcttttgttgcaccactttattgggacttgtatgctccaaaaggtttaaattcagctcga
atatgttttacatgccataactttgagtaccaagggactgcatctgcttcagaattggca
tcatgtggtctggatgcccaggagttaaatagacctgataggatgcaggataacacagca
catgacagtgtcaatcctgttaagggtgcaattgtgttctctaacatagtgacgacagta
tcacccacttatgcacaagaagtccgaactgctgagggaggaaaaggcctccattcaaca
ctgaattctcactcaagaaagttcatgggaatcttaaatgggatcgatactgatgcatgg
aatcctgccaccgataattttctcaaagtgcagtatagtgctaatgatatgcaagggaaa
gcagaaaataaagctgcaacgagaaggaatctagggctttcatctgctgatgatcaacgg
ccattggtaggctgcataacaagattggtgccacagaaaggtgttcatctgattaaacat
gccatatatcgaacactggagatgggcggtcagtttgtacttcttggttcaagtccagtt
ctccacattcagagggaatttgagggtatagcaaaccaattccaaaaccacgaacacatt
cggctaatactaaaatatgacgagtctctttctcatgccatttacgcagcatctgacatg
ttcatcatcccatctatttttgaaccttgtggccttacacagatgatagcaatgagatat
ggttcagtacccattgcaagaaaaactggcggtctaaatgacagcgttttcgatgtcaat
gaggagacaatacctaatcaaattcgaaacggatttacatttacaactcctgatgaacag
ggaataaacggtgccttggagcgtgcatttaatttctacaagaacaataaagagagttgg
aaacaactcgttcaaaagaacatgaatatagatttcagctgggattcttcagcttcacga
tacgaagaactttatgccaagtctatttcgagagcaagggcccaagcgagtaacaattaa
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integrated database retrieval system
