Gossypium raimondii: 105776783
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Entry
105776783 CDS
T04129
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105776783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105776783
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105776783
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
105776783
NCBI-ProteinID:
XP_012455147
UniProt:
A0A0D2UXP4
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Position
10:complement(56680406..56684694)
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AA seq
764 aa
AA seq
DB search
MDKEKPATKRSRDHHDKHHRSHHLDSDHHHGHDSHRRSERKSSSSRREERERSFEREGSR
DRKHREDSYEEAEAKKKRKEREESEERGEKRAKVTEGNREVKRERRKFGDKAKEEEIEFS
NAASGGDPVQNGAALASLPRTGHSPSTKVSSVSTAENKAYSITGSHEVPGSSTDGSSAVG
RSGGNLSLDALAKAKKALQMQKDLAEKLKKIPLLNKGTGSSSVATGVTVEGPVSSVTTAI
ASGLSSSSVLPSTSAAAAPMKPPAGGVAAVPGLASISNLEAVKRAQELAAKMGFRQDPQF
APLINLFPGQVQADILVPQKPTKAPVLRVDALGREIDEHGNIINATKPSNLSTLKVNINK
QKKDSFQILKPELEVDAESNPHFDVRMGINKDKLLRPKRMTFQFVEEGKWSKDAEIIKLK
SQFGEAKAKELKAKQAQLAKAKADINPNLIEVSERITKEKLKDPIPEIEWWDLPILVSGS
YDDIADGGVMTKDKLKKEKITIYVEHPKPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRL
AREKDKQEMIRQGLIEPPKPKVKLSNLMKVLGSEATQDPTKLEMEIRSAAAEREQAHVDR
NIARKLTPAERREKKERKLFDDPNTVETIVSVYRINDLSHPKTSFKVDVNAQENRLTGCA
VISEGISVVVVEGGSKSIKRYGKLMLRRINWAEAVNDNDDDGDEDEEKPPNKCVLVWQGS
VAKSSFSRFSVHECITEAAARKVFADAGVGHYWDLAVNFTDDEF
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagagaaacccgcaaccaaacggtcccgggaccaccacgacaagcaccaccgc
agccaccacctcgactctgaccatcaccacggccacgattcccaccgtcgttcggaacgt
aaatcttcatcatcgcgccgtgaagaacgcgagagatctttcgagagggagggttcgagg
gataggaagcatcgtgaggattcctacgaggaagctgaagcgaagaagaagaggaaagag
agggaagagagtgaggagagaggagagaagagggccaaagttactgaaggaaatagagag
gtaaaaagagagagaagaaaatttggggataaagcaaaggaagaagaaattgagttctcc
aatgctgccagtggtggtgatccagttcaaaatggtgctgctctggcatcattaccaagg
actggtcactcgccatctaccaaggtatcttccgtttctactgctgaaaataaagcatat
agtattaccggatctcatgaggttcctggatctagtacagatggctcttctgccgttggg
agaagtggtggaaatctctctcttgatgccttagccaaagctaaaaaggctttacaaatg
cagaaagatttagcagagaaactgaagaagatacctttgttgaataaaggcacaggctcc
agttcagtggcgactggtgtaacggttgagggaccagtctcatcagtgactacagcaatt
gcaagtggactatcaagctcgtcagtgcttccttctacctctgcagcagcagcccctatg
aagccacctgctggtggggtggctgctgttcctggtcttgcttcaatatcaaacttagaa
gctgttaaacgtgctcaagaattggctgctaagatgggattccgccaggaccctcagttt
gctcctctaataaacttgttccctggacaggtgcaagcagatattctggttcctcagaaa
ccaaccaaggcacctgttctacgtgtcgatgcgcttggtagagaaattgatgaacatggt
aacattataaatgcgaccaaaccaagtaatcttagcaccctcaaggtcaatattaacaag
caaaagaaagattcattccagatccttaaacctgagctagaggtggatgcagaatcaaac
ccacattttgatgtgaggatgggaatcaataaagataagcttcttaggccaaaaaggatg
acgtttcagtttgtagaggaagggaaatggtcgaaagatgctgagatcatcaaattgaag
agtcaatttggtgaagcaaaagcaaaagagctaaaggcaaagcaagcacagttggcaaag
gcaaaggctgatataaatccaaatttgattgaggtgtcagaaagaataacaaaggagaaa
ttgaaagacccaattcctgaaatagagtggtgggatctgcctattctagtttctggttct
tatgatgacatcgctgatggtggtgttatgaccaaagataagctgaagaaggagaagatt
actatttatgttgagcatcccaaaccaattgagcctcctgccgagccagctcctcctcca
cctcagcccctgaagctaacaaaaaaggagcagaagaaacttcgcactcagcgacggctg
gcaagggaaaaggataaacaggagatgattagacagggcctaatagaacctcccaagcca
aaagttaagttgagcaatttaatgaaagttctaggatctgaagctacccaagatcctact
aagcttgaaatggaaatccgtagtgctgctgctgagcgggaacaggctcatgtggataga
aacatcgctcgcaagcttacccctgctgagcgccgtgagaagaaagagaggaagcttttc
gatgacccaaatacggtggagaccattgtttcggtttacaggatcaatgacctctcacat
cccaagaccagctttaaagttgatgttaatgcccaagaaaaccgattaaccggttgtgct
gtgatctccgagggtattagcgttgtagttgtggaaggtggaagcaagtccatcaagagg
tacgggaagctcatgcttaggcgaataaactgggctgaagctgtaaacgacaatgatgat
gatggagatgaagatgaagagaaaccccctaacaagtgtgtattagtctggcaaggtagc
gttgctaaatcaagtttcagcagattttctgttcatgagtgcatcactgaagcagctgca
agaaaggtttttgctgatgctggagtgggccattactgggaccttgcggttaatttcaca
gacgatgagttttga
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