Gossypium raimondii: 105776790
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Entry
105776790 CDS
T04129
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105776790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105776790
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105776790
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
105776790
NCBI-ProteinID:
XP_012455156
UniProt:
A0A0D2UL72
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Position
10:1626122..1630464
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AA seq
586 aa
AA seq
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MEPSELKRSKDSPNSDESTRRSSFPDEVLERVLSLLKSHRDRSSVSLVCKDWYNAERWSR
THVFIGNCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLVPENWGADIHAWLVVFAAKYP
FLEELRLKRMAISDESLEFLAVSFPNFKALSLLSCDGFSTNGLAAIATHCKNLTELDIQE
NGIDDKGGSWLSCFPESFTSLEVLNFANLSSDINFDALERLVGRCKSMRVLKLNRSVSLE
QLQRLLVNAPQLAELGTGSFSEELTFRQYVELESALSNCKNMHTLSGLWDAKGIYLPALY
PVCTHLTFLNLSYAALRSDELAKLLAHCPRLKRLWVLDTVEDKGLEAVGLNCPLLEELRV
FPADPFDEEIIHGVTEAGFVAVSFGCPRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLC
IMNPGQPDYITNEPMDEAFGAVVKTCTKLQRLSVSGRLTDLTFEYIGRYAKNLETLSVAF
AGSSDWGMQCVMGGCSKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRL
LAREMPRLNVEVMKEDGSDDSQADKVYVYRSIAGPRRDAPPSVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaaccatcggagctgaagaggtcgaaggactcgccgaactcggacgagtcaactcgt
cgatcgtcatttcccgacgaagtgctggagcgagttctctcccttttgaaatcccacagg
gaccggagctccgtttctttggtttgcaaggactggtacaacgcggaacggtggtcgagg
actcacgtcttcatcggaaactgttactccgtttcgccggagatcgtcgcgcggcggttc
ccgaagataaggagcgtgacgttgaaggggaaacctaggttttctgacttcaacttggtg
ccggaaaattggggagccgatatccacgcgtggctggtcgttttcgcggccaagtatccg
ttcctcgaagagcttaggcttaagcgaatggcgatcagcgatgaaagcttggagtttctc
gccgtttctttccctaactttaaagctctttcccttttaagctgtgacggttttagcact
aacggacttgccgccattgccactcactgcaagaacttgactgagcttgacatacaggag
aatggcattgatgataaagggggtagttggttgagctgcttcccggaaagcttcacatca
ttggaagtgctcaactttgccaacttgagtagcgatattaatttcgatgctcttgagcgg
cttgtaggtaggtgcaagtcaatgagggttttgaagttgaataggagcgtatcgttggaa
cagttacaaagacttcttgttaatgcccctcaattagctgagctcggtacgggctcgttc
tcggaagaacttactttccgccaatatgtagagcttgaaagtgcgttaagtaattgcaag
aatatgcatacgctatccggtttgtgggatgccaagggaatatatctccctgccttgtat
cctgtgtgcacgcatctaacgttcttgaacttgagctatgctgctttgagaagcgatgaa
ctggctaaacttctggctcattgtccacgacttaaacgcctctgggtcttggacacggta
gaagacaagggactggaggctgttggactgaactgccctttgcttgaggaactacgagtt
ttccctgctgatccgtttgacgaggaaattatccatggagtcactgaagctgggtttgtg
gctgtgtcttttggttgcccgagactccactatgttctctatttttgtcgtcaaatgact
aatgctgctgtagcaaccattgtacagaactgccctgattttactcatttccgattatgc
ataatgaacccgggtcaaccggattatatcacaaatgaacctatggatgaagcttttggt
gctgtggttaagacgtgcactaaacttcagaggctttcagtttcaggtcgcttaactgat
ctgacattcgagtatatcggtaggtatgctaagaacttggagaccctctcagtggcattt
gcaggcagcagtgactgggggatgcagtgtgttatgggaggttgttcaaaactgaggaaa
cttgagatacgagactgcccgttcggaaatgctgcactgctgtcaggtttggagaagtac
gaatctatgaggtcactttggatgtcggcctgcaatgtgacaatgaatggttgtaggcta
ttggcaagggagatgcctaggttgaacgttgaggtaatgaaggaggatggaagtgatgat
agtcaagctgataaagtctatgtttaccgttcgattgctggcccacggagggatgcccca
ccatctgttcttaccctctga
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