KEGG   Gossypium raimondii: 105776916
Entry
105776916         CDS       T04129                                 
Name
(RefSeq) uncharacterized protein LOC105776916
  KO
K12857  Prp8 binding protein
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105776916
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105776916
Spliceosome [BR:gra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    105776916
 Complex C
   U5 SnRNP specific factors
    105776916
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C RMC1_N Nbas_N
Other DBs
NCBI-GeneID: 105776916
NCBI-ProteinID: XP_012455326
UniProt: A0A0D2USM2
LinkDB
Position
10:20264723..20267638
AA seq 342 aa
MEIVPREGESALSGPRPMEWSTVPYAPQGPDRNGNKRTSSLESPIMLLTGHQSSIYTVKF
NPAGTVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAILDLHWTTDGSQIISASPDKTLR
AWDVETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGAIQTFPDKY
QITAVSFSDASDKIFTGGIDNDIKVWDLRKGEVTMTLQGHQDMITGMSLSPDGSYLLTNG
MDCKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYIWDT
TSRRILYKLPGHTGSVNESVFHPNEPIIGSCSSDKQIYLGEI
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggaaattgttccaagggagggtgaaagtgctttgtcaggtccaaggccaatggaatgg
tccactgttccgtatgctcctcaaggaccagacagaaatggaaacaaacgtacatcaagt
ctcgaatcaccaatcatgttgcttaccggacatcagagttctatatataccgtgaagttc
aatccagctgggactgttgttgcatctggatcgcatgacagggaaatttttctgtggaat
gtccatggagactgcaaaaacttcatggttctcaaagggcacaagaatgcaattttggat
cttcattggaccactgatggatcccagataatatcagctagccccgacaaaactttgaga
gcatgggatgttgaaacagggaaacaaatcaaaaagatggcagaacattcttcttttgtg
aattcatgttgtccatcacggagagggccacctcttgttgttagtggatctgatgacgga
actgccaaactttgggatatgcgtcagagaggtgccatccaaacatttcctgataaatac
caaattacagctgtcagtttctccgatgcatcagataagatcttcaccggtggcattgac
aatgatattaaggtttgggacttacgtaaaggtgaagtaacaatgacacttcaaggtcat
caagacatgataacaggtatgagtttgagtcctgatggttcctatcttctcaccaatggt
atggattgcaaactctgcatatgggatatgcgcccttatgcaccacagaatcgttgtgta
aagattttcgaaggtcaccaacacaattttgaaaagaacttgttgaaatgtggctggtca
ccagatggaagcaaggtcacagccggtagttcggatagaatggtctacatatgggataca
acatctcgacgcatcttgtacaagcttcctggccacacaggatctgtgaatgagtccgta
ttccatcctaatgaaccgatcattggttcttgtagtagcgacaaacagatatatctgggg
gagatatga

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