Gossypium raimondii: 105776919
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Entry
105776919 CDS
T04129
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gra
Gossypium raimondii
Pathway
gra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105776919
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gra01007
]
105776919
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105776919
Enzymes [BR:
gra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
105776919
Amino acid related enzymes [BR:
gra01007
]
Aminoacyl-tRNA synthetase
Class II (A)
105776919
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
105776919
Prokaryotic type
Other AARSs
105776919
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Motif
Other DBs
NCBI-GeneID:
105776919
NCBI-ProteinID:
XP_012455334
UniProt:
A0A0D2USQ2
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Position
10:complement(21005180..21011284)
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AA seq
613 aa
AA seq
DB search
MEGSVEETAKAVSDLALDSSAAGETQSKNARKKELKNKQREEERRRKEEEKAAKQAAAKV
STQSQKHAAADDEDMDPTQFHENRLKFLAAQKAEGKNPYPHKFFTSMSIVEYIDKYGSLG
NGEHIEDATVSLAGRIMSKRASSSKLFFYDLHGGGAKVQVMADASKSGLDEAEFAKFHST
VKRGDIVGVTGFPGKTKRGELSIFPKSFLVLSHCLHMMPRQKAGPDASVKKTDVWIPGST
RNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRSKIISYVRSFLDNLDFLEVETPMMN
MIAGGAAARPFVTHHNELNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHN
PEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGSYKIKYHANGLDNAPIEIDFTPPFR
RLDMVEELEKMANLNIPKDFSSDETNKYLADACAKLEIKCPPPQTTARLLDKLVGHFLEE
TCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFAE
QLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMK
PQDEPSTKAAPAT
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcagtcgaagaaacggcgaaagcagtttccgatttagcattggattcgtct
gctgccggtgaaactcagagcaaaaatgctcgtaagaaggaacttaaaaataagcagagg
gaagaggagcgtcgccgtaaggaggaggagaaagcagccaaacaggctgcagccaaggtg
agcacacaaagtcagaaacatgcagccgctgatgacgaagatatggatcccacgcaattc
cacgagaacaggctgaaatttcttgcggcccaaaaggcagaggggaaaaatccttatcct
cataaattcttcacatcaatgtctatcgttgaatatatagataaatatggaagcctaggc
aatggggagcatattgaggatgccacagtatctttagccgggcgaattatgagcaaaagg
gcatccagctcaaagctgttcttctatgacttgcatggcggtggtgccaaagtccaggtt
atggctgatgcgagcaagtcaggcttggatgaagctgaattcgcaaaattccattcaact
gtgaagcgtggtgatatagttggtgtcactgggtttccaggcaaaactaagagaggagag
ttgagcatctttccaaagtcatttttagttttatcccattgtctccatatgatgccaagg
caaaaagcaggccctgatgccagcgtgaagaaaactgatgtatggatcccaggaagtact
aggaatcccgaaacatatattttgaaggatcaggaaactcgttatcgccaacgttatctt
gatttgatgttaaaccttgaggttcgtcaaatattcaagactcggtcaaagatcatttct
tatgtgaggagctttcttgacaatcttgatttcttggaggttgaaactcccatgatgaac
atgattgctggaggtgcagctgcccgtccatttgtaacccatcacaatgaattaaatatg
aagctctatatgcgtattgcacccgagttatatcttaaggagctagtagttggtggactg
gatcgtgtgtatgagattggaaaacagtttagaaatgagggcattgatttgactcacaat
cctgaattcactacctgtgagttctatatggcttttgctgactataatgacttgatggag
cttactgaaaaaatgttgagtgggatggtcaaggaacttacaggcagctataaaattaaa
taccatgcaaatggtcttgacaatgctccaattgagattgatttcactccacctttcagg
aggcttgacatggtagaggagttagagaagatggctaacctcaacatacccaaggacttt
tccagtgatgaaactaacaagtatttggcagatgcatgtgcaaagctcgagattaaatgc
ccccctcctcaaactacagcacgtttgttggataaacttgttgggcattttctagaagag
acgtgtgtgaatcctactttcatcatcaaccatcctgaaataatgagtcctttggcaaaa
tggcataggtcaaaaccagggctgactgaacgtttcgagctgtttatcaacaaacatgaa
ctttgcaatgcatacactgagttgaatgatcctgttgtacaacgtcaacgctttgctgaa
caactgaaggatcgacaatctggtgatgatgaagctatggctctagatgaaacattctgt
actgcacttgagtatggattgccgccaactggtggttggggattgggtatcgatcggcta
gctatgctattaacagattcacagaatatcaaggaggttcttctcttcccagccatgaaa
cctcaggatgaaccatccactaaagcagctccagcaacttag
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