KEGG   Gossypium raimondii: 105776923
Entry
105776923         CDS       T04129                                 
Name
(RefSeq) uncharacterized protein LOC105776923
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105776923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105776923
Spliceosome [BR:gra03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105776923
 Complex B
    105776923
SSDB
Motif
Pfam: RRM_1 RRM_MUD2_C DUF8489 RBD_DEAH11
Other DBs
NCBI-GeneID: 105776923
NCBI-ProteinID: XP_012455341
UniProt: A0A0D2VNJ6
LinkDB
Position
10:complement(41010731..41017425)
AA seq 1026 aa
MGRSSRRKEKHEKVGELPQHDSNEGTSARTRPFNYDELMSKRNSKKVDEKVESVKEGNTE
VRKIEKDSLIHKDFNVNRYDGGNGHGKEFSVGHERHLLGDREKRSSRKKIENADRRNDSI
SKQKARENHEPERRLKSEVRKDTDAKDESKYEKQTHVKRKTEKTAGGSENAYAKKHTRDL
VERDRHVSRNEGKSERDDKRKHQTRDDEENRERNTTKRHETRKGHASETSDRKEKKEPSR
SHHEDSNHKRRRSQSRECEDRHRRSISLSPRVHKRASHHVSEHELSSHGVKVRSGKHSDD
RSRMTSNGSSGHHRRHGGSSSGLGGYSPRKRKTEASVRTPSPVHRSMEKRTAKWDLAPAE
TENMVSGSASTNLQASSQLVSINMHAMVNALPSVSVTGNPLVVSSTGSLSFDSVQLTEAT
RPMRRLYVENVPASASEKAMMESFNNFLLSSGVNHIRGTKPCISCIIHKGKGQALVEFLT
PEDASAALSFDGSTLSGSILKIRRPKDFVEVTGEPEKSKATVTTVNDVVEGSHDRIFIGG
ISKALSSEMFVEIANAFGPLKAYHFDNNEDLHEQYAILEYVDQSVTHKACAGLNGMKLGG
QVITAVQAVLDGFSSGNGGDRNSCIIPQLARPLLQKPTQVLKLKNLFPEDFSSLSEAEVE
EILEDVRLECSRFGTIKSVNVVKHAKSIMANGENKMNDNMRETGTGEKLADDEINVETET
MEEVTYGNSGRTAVVNFPSNSHKLVAGNSYNDEKPAGNLLDNELCRQGEFEGDINNEDVN
HGSLDDELYPPGGLDSNSSAGAQLDTEMAVEDLTLEIVGKTISREAPNPIHTSKEESNYH
FDRNADKIKSEAMNVEKISVVEENANLEEVNRKLPEGLSKIEDPSFKSESITSFQEIPAQ
LNTQKEEPDSQNDKVDDNIKSEIINVDKKLVPKEELQQEVGAGKLPKAVDGSAGSTRMEF
NAIEKDENREKNNLKKIFEPGCVFVQYRRTEASCTAAHSIHGRLFDNRIVTVEYIDPNLY
RVKFPE
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgggcagatcgagtcggcgtaaggaaaagcatgaaaaagttggggagcttccacaacat
gattccaatgaaggaacttctgcccggactaggcctttcaactacgatgagctgatgtcc
aagaggaatagtaaaaaagttgatgaaaaagttgaaagtgtcaaagaaggaaatacagaa
gtgaggaagatagaaaaggacagcctaatccataaagattttaatgttaacagatatgat
ggaggaaatggacatggcaaggaattttctgttggtcatgaaaggcacctattgggagac
agggagaagagaagttcccgcaagaaaatagagaatgcggataggagaaacgatagcatc
tctaaacagaaagctagggagaatcatgagcctgaaagaagattgaagtctgaagtgaga
aaagatacagatgctaaggatgaaagcaaatatgagaaacaaactcatgtgaagagaaaa
actgagaaaacagctggtggttcagaaaatgcatacgctaagaagcatactagagacttg
gtggagagggataggcatgtcagcagaaatgaggggaaatctgagagagatgacaagaga
aaacatcaaactagagatgatgaagaaaatagagaaaggaataccacaaaaagacatgag
acccgaaaggggcatgcttcagaaactagtgataggaaggagaagaaagaaccatcgaga
tcccatcatgaggactcaaaccataaaaggagacgttcacagagccgagagtgtgaggac
aggcatagaagatctatttctctctcaccaagggtgcacaagcgtgcatctcatcatgtg
tcagagcatgaactttcctcacatggtgtaaaagtgaggtctggaaaacattctgatgac
aggagcagaatgacaagtaatggttcgagtggccaccataggcgacatggtgggtccagt
agtggtcttggtggctactctccaaggaagagaaagactgaagcttctgttaggacaccc
tcgccagttcatcgttcaatggagaagagaacagctaaatgggatcttgcacctgcagaa
acagaaaatatggtttctggttcagcttctactaatttacaggcatcaagtcaattggtt
tccatcaatatgcatgctatggtcaatgctcttcctagtgtttcagtgacagggaatcct
ctagttgtgtcttcgaccggctctttatcctttgactcagttcaactaactgaagctacc
aggcctatgagaaggctttatgtagaaaatgtgccagcttcagcatctgagaaagctatg
atggaatccttcaacaattttttgctttcatctggcgttaatcatatccgtggaaccaaa
ccatgcattagctgtataatacacaaaggaaagggccaagctcttgttgaattccttaca
ccagaggatgcttcggcagctctttcttttgatggcagtaccttgtctggttccattctc
aaaatcaggcgccctaaagacttcgttgaagtgactggtgaaccagagaaatcgaaagca
acagtgactacagtcaatgatgttgtggagggttcacatgacaggatattcattggtggg
atttcaaaggctctttcatctgaaatgtttgtggagattgctaatgccttcggtcctttg
aaggcatatcactttgataacaatgaggatcttcatgaacaatatgctattctcgagtat
gtcgaccagtctgttactcacaaagcctgtgctggtctgaatggaatgaagttgggaggg
caagtaatcactgcagttcaggctgttcttgatggtttttcctcgggaaatggtggagat
cgaaattcctgtattattcctcaacttgcgaggccgcttcttcagaagcctactcaagtc
cttaagcttaaaaatctgttcccagaggacttctcatctttatctgaggcggaggtggaa
gaaatactagaagatgtacggttagagtgttccaggtttggtacaatcaaatccgttaat
gttgtcaagcatgcgaagagtatcatggcaaatggagaaaacaaaatgaatgataatatg
agggaaactggaactggagagaagctagctgatgacgaaataaatgttgaaacggagacg
atggaagaagtcacttatggaaactctggacgaactgctgttgtgaactttccgagtaat
tctcacaagttagtggcaggcaatagttataatgatgagaaacctgctggcaaccttttg
gacaatgagttatgccgacagggtgagtttgaaggtgatatcaataatgaagatgtaaac
catgggagtttggatgatgaactgtatccaccaggggggcttgatagcaacagttctgct
ggagctcagcttgatactgaaatggctgttgaagatctgactttggagattgtaggcaag
acaatttctcgagaggcccctaatccgattcatacctcaaaagaggaatcaaattatcat
tttgacaggaatgctgataaaattaaaagtgaagccatgaatgttgagaagatatcagta
gttgaagagaatgcaaatctggaggaagtcaatagaaagttacctgaaggtctttcaaag
atcgaagatccttcctttaagagtgagtcaataacaagttttcaagagatccctgcccag
ctgaatacccaaaaagaggaaccagactctcaaaatgacaaggttgatgataatattaaa
agcgaaatcataaatgtagacaagaaattggtgcccaaagaagagctgcagcaggaagta
ggcgctggaaagttaccaaaagctgtagatggttctgctggtagcacaagaatggaattc
aatgctattgagaaggatgaaaatagggagaagaacaatttgaaaaagatttttgagccc
ggctgtgtttttgttcagtatagaagaacagaagcatcatgcacagctgcacactctata
catggacggttatttgataaccggattgtgacagtagagtacatcgatccaaacctttac
cgggtgaaatttccggaataa

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