Gossypium raimondii: 105776977
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Entry
105776977 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6 isoform X2
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105776977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105776977
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
105776977
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
HECT type E3
105776977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
105776977
NCBI-ProteinID:
XP_012455427
UniProt:
A0A0D2RQC4
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All DBs
Position
10:49063808..49074459
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AA seq
1032 aa
AA seq
DB search
MFFTGDPSSRKRVDLGGRSSKERDRQKLLEQTRLERNRRLWLRRQNSAALTIQKYFRGRK
VVEAEHAKVREHFYQTYRKHCQNVDRHCFGPDSEFLRQLIFFFDAHNLNDFSVLVETCRL
IQNFVRDSGDTVGLFAGMDYSPNHSLVAYRLKRLSFACIQAIHQNRNQLKDQLLMAPEEA
TASTTILLQTLLLFLDPKLPWACKAVGYLMQRNVFSLFREVILMVKENISAGGSFGKIST
LERVLALMISHVGQSTCVCSNVDSQWSFSSQILTIPFIWQLFPYLKVVFASWRLTLHYTN
KMVLCVQNHANLLPTDISNKFPGYACLLGNILETAGAALSQPDCSFEMAMDLAAVTTFLL
DALPPIKSSSRESPTVAEDGMIIGDEIEEIVLDSNLEQQITNAIDSRFLLQLTNVLFGGI
SAACDPHNEGPDDKEVAAVTAACAFLHVTFNTLPLERIMTVLAYRTELVPVLWNFIKRCH
HNQKWSPLPERFSYLLGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDVRCL
IVILRQALWQLLWVIPSVHPTCGKSISNTSSHKRQLVETIQNRVGTVVSELLSQLQDWNN
RRQFTPPSDFHADGVNDFFISQAAVEGSKAHDILKQAPFLIPFTSRAKIFTSQLASVRQR
HGAHGVFTRNRFRIRRDHILEDAYNQMSQLSEEDLRGLIRVTFVNEFGVEEAGIDGGGIF
KDFMENITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGTLLAKAMFEGIL
VDIPFATFLLSKLKQKYNYLNDLPSLDPELYRHLIFLKHYKGDISELELYFVIVNNEYGE
QTEEELLPGGKNIHVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLMQKDWIDMFN
EHELQLLISGSLDSLDVDDLRCHTNYAGGYHGEHYVIDMFWEVLKSFSLENQKKFLKFVT
GCSRGPLLGFKYLEPLFCIQRAAGSASEEALDRLPTSATCMNLLKLPPYRSKEQLEAKLV
YAINADAGFDLS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaccggtgatccttccagtcggaagcgagttgatttgggtggtcggagctcc
aaggagagagataggcagaaacttctagaacaaacgcgattggagcggaatcgccgcctc
tggttgcgtcgccagaattctgcagctctcacgattcagaaatacttcagagggagaaag
gttgtggaagctgaacatgccaaggtccgagagcacttctaccaaacctacagaaagcac
tgccaaaatgtagataggcattgttttggtccagactcagagtttctccgccagctaatt
ttcttctttgatgcccacaatttaaatgatttttcagttcttgttgagacttgccgatta
attcagaattttgttcgagatagcggggataccgttggactctttgcaggtatggactat
tcacccaatcattctttagttgcctacagactgaagcggctctcatttgcttgtattcag
gctatacatcagaacagaaatcaattgaaagatcaactgttgatggctcctgaggaggcc
actgcatcaacaaccatcttgcttcaaacattgcttttgtttttagatcctaaactgcca
tgggcatgtaaggcagttggttatctcatgcaaagaaatgtattctctctgtttagagaa
gttattctaatggtaaaggaaaatataagtgctggaggttcttttgggaaaatatctaca
ttggagcgtgtgcttgctcttatgatttctcatgttggtcagagtacatgtgtttgctca
aatgtggattcacaatggagtttctcatcccaaattcttacaatccctttcatatggcaa
ctttttccatacttaaaagtggtttttgcttcttggagattgactctgcactacactaat
aagatggtcttgtgtgtgcaaaaccacgctaatttacttcccactgatatatcaaataag
tttcctggttatgcctgcctccttggtaatattttagaaacagcaggtgctgctttatct
cagcctgactgctcatttgaaatggccatggaccttgcagctgttacaactttcttgttg
gatgctcttcctcctataaaatcatcaagcagagaaagtcctacagttgcagaggatggt
atgatcataggtgatgaaatagaggaaatagttttggatagtaatttggagcagcagata
actaatgctattgattcacgctttctgctgcaattgactaatgtgttgtttggagggatt
tccgctgcttgtgatccacataatgaaggaccagatgataaggaggtggcagccgttact
gctgcttgtgcttttctgcatgttactttcaatactttacctctagagagaatcatgact
gtactggcctatagaactgaacttgttccagtgctttggaattttattaagcgatgtcat
cataatcaaaagtggtcacccttgcctgagcgtttttcatatctcttgggagatgcacct
ggttggctgctacctctggccgttttctgtccagtgtataagcacatgcttatgatagtt
gataatgaggagttttatgagcaggagaagccattgtctttgaaggatgtcagatgccta
attgtcattctgagacaggcgttatggcagctcctatgggtgattccttctgttcaccct
acctgtgggaaatctatctccaatacttcttctcataagaggcaacttgttgaaactatt
caaaatagggttggtactgtggtctcagagctcctatcccagttgcaagattggaataac
cggcggcaatttactccgcccagtgactttcatgctgatggtgtaaatgacttttttatt
tctcaggctgcggtggaaggcagcaaagcacatgacatattgaagcaagcaccttttttg
attccattcaccagcagagctaaaatattcacttctcaactagcatcagttaggcagaga
catggggctcatggagtttttaccaggaaccgattcagaatacgaagggatcatatttta
gaagatgcttataatcagatgagtcaattgtccgaggaggatcttagaggactgattcga
gtaacttttgtcaatgagtttggggtggaggaggctggcattgatggtggtggaattttc
aaagattttatggagaatattactcgggctgcatttgatgtgcaatatgggttatttaag
gaaacagctgatcacctcctatatccaaatcctggatctgggatgatacatgaacagcat
ctccaatttttccatttcttgggaacactacttgcaaaggccatgtttgaagggattctt
gtggatataccatttgcgacattcttattgagcaaattgaagcaaaagtacaattattta
aatgacttgccttctttggatccagaattatatcgccaccttattttcttaaagcattat
aaaggggacatatcagagttggagctctactttgtaattgtgaataatgaatacggcgaa
caaacagaagaagagctgcttccaggaggcaaaaacatacatgttacaaatgagaatgtc
atcacatttattcaccttgtatctaaccaccgtttgaattttcagatacgtcagcaaagt
tctcatttccttaggggatttcagcagcttatgcagaaagattggattgatatgttcaat
gaacatgaattgcagcttctgatttcaggttcacttgatagcttggatgttgatgacctt
cgatgccacaccaattacgctggtggctatcatggcgagcattatgtcattgatatgttt
tgggaagtcctcaaaagcttttcactggaaaatcaaaagaaatttttgaagtttgtgact
ggttgttctcgaggacctttgctgggattcaaatatctcgaacctctattttgcatacaa
agagctgctggaagtgcctctgaagaagcattggaccgattaccaacatcagctacttgt
atgaaccttctaaagcttccaccatatagaagcaaagagcaactggaagccaaattggtg
tatgcaataaatgcagatgcgggttttgatttgagttga
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integrated database retrieval system
