Gossypium raimondii: 105776978
Help
Entry
105776978 CDS
T04129
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105776978
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105776978
Enzymes [BR:
gra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105776978
Protein phosphatases and associated proteins [BR:
gra01009
]
HAD phosphatases
Fcp/Scp phosphatases
105776978
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
105776978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
105776978
NCBI-ProteinID:
XP_012455431
UniProt:
A0A0D2VHD4
LinkDB
All DBs
Position
10:1881041..1888333
Genome browser
AA seq
973 aa
AA seq
DB search
MSMYKSVVCRGDEVLGEVEIYPQQQQLREEEEEYGGKITVMEEEMKEIRIGYLTQGSERC
PPLAVLHTITSTGICFKMESSKDNNYSSSFQDTPPLHLLHSECIRDNKTAVMPMGDCELH
LVAMYSRNSDRPCFWGFNVARGLYDSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDRIE
ALQRKMNTEVDTQRAAGMMAEIKRYQDDKAILKQYAENDQVVENGKVIKVQSEIVQPLSD
NHQPIIRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCT
MAERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDD
RLKVWDEKDQPRVHVVPAFAPYFAPQAEANNTIPVLCVARNVACNVRGGFFREFDEGLLQ
KIPEISYEDDIKDIPSPPDVGNYLVSEDDTSASTANKDPPIFDGMADAEVERRLKEAISA
ASTVSSASINLDPRLASSLQFTMPSSSSVPLLAVQSSMASYPNMQFPQAAQVIKPVAPVV
SPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDTRDHTPPEPAFPPARPAMQVPV
SRAQSRGSWFSSDEEMSPRQLNRAVPKEFPLDSEQMHMEKHRGPPFFPKVESPIPSERLL
RENQRLPKEALHRDDRLGLNHTPSSYHSFPGEEMPLGRSSSSHKDLDFESGRTIPSGETP
AGVLQDIAMKCGAKVEFRPALVASMDLQFSIEAWFAGEKVGEGTGRTRREAQRQAAEDSI
KSLANTYLSRIKPDTGSTQGDLSRSANTNENGFPGNLNLYGNQQSPKEESMPFSNAPEPS
RLLDPRLEGSRRSMGSVTALKELCMMEGLGVVFQAQPPASNTLQKDEVYAEVEVDGQVLG
KGTGFTWEEAKMQAAEKALGSLRSMLGQFTQKRQGSPRSLQDMPSKRLKPEFPRVLHRMP
SSGRYHKNAPPVP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtacaaatcggttgtgtgtcgaggggatgaagtgttgggggaggttgagatt
tatccacaacagcagcagctaagggaagaagaagaagaatatgggggaaaaataacggtg
atggaagaagaaatgaaggaaatcaggataggatatttgacgcaaggcagtgagagatgt
ccaccactggcagtgttgcataccattactagtactgggatttgcttcaaaatggaatca
tcaaaggacaacaactactcatcttcatttcaagacacgcctccgcttcatcttttgcac
tccgaatgtatcagagacaacaagactgcagtaatgcctatgggagattgtgagctccat
ttggttgcaatgtattctaggaatagcgataggccctgtttctggggattcaatgttgca
aggggactctatgattcttgtcttgtcatgttgaacctaagatgtttaggaattgtattc
gatctggatgaaactctagttgttgcaaatacaatgcggtcattcgaggacagaatagag
gctttgcagcgaaagatgaacaccgaggttgatacacaacgtgctgcaggtatgatggcc
gagattaagcgttatcaagatgataaggccatattaaagcaatacgcagagaatgatcaa
gttgttgaaaatgggaaggtgattaaggttcagtctgagattgttcaacccttgtctgat
aatcaccaacctattattcgacctctcattcgattacaagagaaaaacattattttgaca
cgcatcaatccacagattcgtgatactagtgttcttgtgagactgagacctgcatgggag
gatctgcgaagctacttgactgcaagagggcgtaaacggtttgaggtttatgtttgtaca
atggctgaaagagattatgctttggaaatgtggagacttcttgatcctgagtcaaatttg
ataaattcaaaagaattgttggatcgtattgtctgtgtcaagtctggtttgaggaaatca
ttattcaatgtctttcaagatggcatatgccatcccaaaatggcattggttattgatgat
cgcttaaaagtttgggatgagaaggatcagcctcgtgtgcacgttgttcctgcatttgct
ccatattttgctcctcaagctgaggcaaataatactattccagttttgtgcgttgcgaga
aatgttgcctgcaatgttagaggtggttttttcagagaatttgatgaaggccttctgcaa
aaaattcctgaaatttcatatgaagatgatattaaagatattccttcgcctcctgatgtg
ggcaactatttggtctctgaggatgacacttctgcttcaaccgcaaacaaagatccacct
atatttgatggcatggcagatgctgaggttgaaagaagactaaaggaggcaatttcagca
gcgtcaacagtctcttcagcaagcattaacctagatccaaggctggcttcttctcttcag
ttcaccatgccatcttctagttcagttccattgttggcagttcagtcatcaatggcatca
tatccgaacatgcagtttcctcaggcagcacaagtgattaaaccagtggctcctgttgtt
tccccagaaccaagcttgcaaagttccccggctagagaagaaggtgaggttccagaatca
gaactggatcctgatacaaggaggaggcttctgatattgcaacatgggcaagataccaga
gatcacacaccacctgaacctgcatttccccctgcaagacccgcaatgcaagttccagtt
tcacgtgctcaatcacgtggaagttggttttcttctgatgaggagatgagcccacggcaa
cttaaccgagcagttcccaaagaatttcctttagattctgagcaaatgcatatggagaag
catcggggtcctccttttttccctaaggttgagagtcctattccatcagagagacttctt
cgtgaaaatcaaagattaccaaaagaggcacttcatagagatgatcgtctggggttaaac
catacaccgtctagttatcattcttttccaggtgaggagatgccccttggtcgatcatct
tctagtcataaggatcttgactttgaatctggacgaactattccaagtggagaaactcca
gccggagttttacaagatattgccatgaagtgcggagccaaggtggaattcagaccagct
ttggttgctagcatggacctgcaattctccattgaggcttggtttgctggggagaaagtt
ggtgaaggtactgggagaacaagaagagaagcacaacgtcaggctgcagaggattctata
aaaagcttagctaatacatatttgtcacgaattaagcctgatactgggtctacacaaggg
gatttaagtaggtcggccaacacaaatgagaatggctttcctggtaatttgaatttgtat
gggaaccagcaatcccctaaagaggaatctatgccattttcaaatgcaccagaaccgtct
aggcttcttgatccaaggctagaaggctccaggagatctatgggttcagtcactgcactt
aaagaactatgcatgatggagggccttggggtagtttttcaagcacagcctcctgcatct
aatacattgcagaaagatgaagtatacgcagaggttgaagtagatgggcaggttttagga
aaagggactggtttcacatgggaagaggctaagatgcaggctgctgaaaaggccctcgga
agtctaagatcaatgctcggtcaatttactcagaaacgtcaaggttctccaaggtcattg
caagatatgccaagtaaacgcctaaagcctgagtttccacgtgttctacaccggatgccc
tcttctggtagatatcacaagaatgctcctccggttccttga
DBGET
integrated database retrieval system
