Gossypium raimondii: 105777042
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Entry
105777042 CDS
T04129
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
gra
Gossypium raimondii
Pathway
gra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105777042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105777042
Membrane trafficking [BR:
gra04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
105777042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
NACHT
NPHP3_N
AAA_5
ATPase_2
RNA_helicase
RuvB_N
AAA_14
nSTAND3
AAA_7
IstB_IS21
Mg_chelatase
Bac_DnaA
AAA_24
Parvo_NS1
AAA_18
TsaE
NB-ARC
PhoH
ATPase
AAA_30
Sigma54_activat
TIP49
ABC_tran
AAA_lid_PRS2_C
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
105777042
NCBI-ProteinID:
XP_012455541
UniProt:
A0A0D2RH80
LinkDB
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Position
10:complement(3991117..3999410)
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AA seq
1130 aa
AA seq
DB search
MEFEVRHVAGIEDCFVSLPLLLIQTLQSTRSSLLPPLLTLELRLPRASDDPWIVAWSGAT
SSSTAIEVSHQFAECISLPNHTTVQVRAASNLAKATLVTMEPDTEDDWEILELNSEHAEA
AILKQVRIVYEGMRFPLWLHGRTIITFHVISTFPKKAVVQLVPGTEVAVAPKRRKKNLNN
IESSTGESHGAKALLRLQDSDRRLFHKSNVKGVELGVALTSVAFIHQETAKRLSLESLQL
VVIVPRLSAKESVKNLENDASRMKRSLTSKEVNSGISIDNKEFRQVIVRLLISDSVAKGH
LMVTRSLRLYLRAGLHSWVYLKGYNAALKKEIPVLSLSPCHFKLVANDKAIGNGLEMLDR
HKTHRSQNLLPISGSGTSLGVVNWSTHENVVAALSSEFPYQEAGDCNHQDNKKGLECLLQ
AWFLAQLDAIASNAGTEVNTLILGSESLLHFQVTIHDSGTYGLVSSNGFSEKRNKTKDLP
IEISYILTISEETLHSGQVNAYELSFDDGNKRVDVQGGVELFGKLTLGNPVSLCSVKDRT
SVKGFSTDVSSLSWMGATASDVINRLMVLLAPSSGIWFSTYNLPFPGHVLIYGPAGSGKT
LLARAVAKSLEEHEDLLAHVIFISCSGLSLEKAPTIRQALSSFISEALDHAPSVVVFDDL
DSIIQSSSDSEGSQPSTSVVALTKFLTDIMDEFGEKRKSSCGIGPVAFIASVQSLESIPQ
SLSSSGRFDFHVQLPAPAASERGAILKHEIQRRSLQCHDDIIMDVASKCDGYDAYDLEIL
VDRAVHAAVGRFLPSDSGSEEHMNPMLVRDDFSHAMHEFLPVAMRDITISAPDVGRSGWD
DVGGLNDIRDAIKEMIELPSKFPNIFAKAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSL
RFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRV
VNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILTVL
SRKLPLASDVDLDAIAYMTEGFSGADLQALLSDAQLAAVHEHLSSANSNEPGKMPVITDT
VLKSIASKARPSVSEAEKQRLYGIYSQFLDSKRSAAAQSRDAKGKRATLA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgaggtgagacacgtggctggaatagaagactgtttcgtatctcttcccctt
ttactcatccaaacccttcagtccacgcgctcttctctcctccctccccttctcactctc
gagcttcgcctcccacgcgcctccgacgatccttggattgtcgcttggtccggcgctact
tcttcttccaccgctatcgaggtttcacaccagtttgctgaatgtatatcgttgccgaat
cacaccacagttcaagtacgagcagcttctaatttggcaaaggctacgttagtcacaatg
gaacctgataccgaggatgattgggaaattttagagcttaactctgagcatgctgaagct
gcaatattaaagcaggtcaggattgtctatgaaggaatgcggtttcctctatggttacat
ggtcgaacaatcataaccttccatgtcatttcaacttttcccaagaaagcggtggttcaa
cttgtacctggaactgaagttgccgttgctccaaagagacgtaagaaaaatttaaacaac
atagaatcgtctactggagaatctcatggtgcaaaagcactgcttcgcttgcaagattca
gatagaagattgtttcataaaagtaatgtcaaaggtgttgagctaggggtagcacttacg
tctgttgcctttattcatcaagaaacagctaaaaggctttcattggagtctcttcagttg
gttgttattgtgccaaggttatcagctaaagagagcgttaagaatctggaaaatgatgcc
tctagaatgaaaagaagtttaacttcgaaggaagtaaatagtgggatttcaatcgataat
aaggaattccgacaagtgattgttcgccttttaatttcagattcggtcgctaaaggacat
ttaatggttacgcggtctctccgactttatttgagagcaggactacattcatgggtttat
ttaaaggggtataatgctgctttgaagaaggaaattcctgtactttcactttctccttgc
cacttcaaattggttgcaaatgataaggctattgggaatgggcttgaaatgcttgatcgt
cataaaactcataggtcacaaaacttactcccaatatctggttcaggaacctctttagga
gtagtaaattggtcaactcatgagaatgttgttgctgcactttcttctgaatttccttac
caagaagctggagactgcaatcatcaagacaataaaaagggcttagaatgtcttcttcag
gcatggtttcttgctcaacttgatgctatagcttcaaatgcagggacggaagttaacacg
ttgattttggggagtgaaagtctacttcactttcaggtgaccatacacgattctggaact
tatggacttgtctcatctaatggtttttcagagaagagaaataagacaaaggatttgcca
attgaaatttcatacatattgaccatctcagaggaaacactccacagtggacaagtcaat
gcatatgaactttcatttgatgatggaaacaagagggttgatgtccagggaggtgtagag
ttgtttggaaagctaactttgggtaaccctgtgtccttatgttctgttaaagacagaaca
tctgtcaaggggtttagcacagatgtatcttcattaagctggatgggtgcaactgcttct
gatgttatcaacagattgatggtgttgttggctccttcttctggaatttggtttagtact
tataatcttcctttcccaggacatgttctaatatatggtccagcgggttctgggaagaca
ttattggcaagagctgttgcaaaatcccttgaagaacatgaagacctgttagcacatgta
atctttataagctgctctggactttctttagagaaggctccaaccattcgtcaagcactt
tcaagtttcatatctgaagctctagatcatgctccttcagttgtcgtatttgatgatctt
gatagcatcatccaatcttcttctgactcagaaggatctcaaccttcaacctcagttgtt
gcacttactaaatttctcaccgacatcatggatgaatttggggaaaagaggaagagctct
tgtggtattggtccagtagcttttatagcttctgtgcaatctctggagagtatcccccag
tctttgagctcatcaggaaggtttgatttccatgtacaactgcctgcacctgctgcctct
gaacgtggggccatactgaagcatgaaattcagaggcgttccctacagtgtcatgatgat
atcataatggatgtagcttccaaatgtgatggatatgatgcatatgatctggaaatattg
gttgatagagctgttcatgctgctgttggccggtttttgccttctgattctggttctgaa
gaacacatgaaccccatgctagttagggatgatttctctcatgctatgcatgagttcctt
ccagttgccatgcgtgacataactatatcagctcctgatgttggtcgctctggttgggac
gatgttggtggtctcaatgacattcgggatgctatcaaagagatgatagaactgccttca
aagttcccaaatatatttgccaaagcgcctttaaggttgcgatctaatgttctgttgtat
ggtcctcctggttgtggcaagactcacattgttggtgctgctgctgctgcttgttcacta
agatttatatcagtgaaagggcctgaactactgaacaaatacattggtgcttctgagcaa
gctgttcgagatattttctctaaggcagctgctgctgcaccttgcctcctcttttttgat
gaatttgattccattgcccctaaaagaggacatgacaacactggagtaactgatcgagtt
gtcaatcaattcctaactgaattagatggtgttgaagttttgactggtgtatttgtgttt
gctgcaacaagtagaccggatctgcttgatgctgcattgctgagaccaggtaggcttgat
cgcctccttttctgtgattttccatctccccgggaaaggttggatattctgaccgttctt
tcaagaaagttgccattggccagtgatgtcgatttagatgccatagcatatatgacagaa
ggatttagcggagctgatctccaagctcttctctcagatgcacagcttgctgcggttcat
gaacatttgagcagtgcgaatagcaatgagcctggcaaaatgccggtcataactgatact
gttctgaagtctattgcttccaaggcaagaccgtcagtttcagaagccgaaaaacagaga
ctgtatggaatctacagtcagtttctggattcaaagcgatctgccgccgcacagtcgagg
gatgcaaaaggcaagagggcaactctggcatga
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