Gossypium raimondii: 105777157
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Entry
105777157 CDS
T04129
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105777157
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
105777157
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_RIG_2nd
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
105777157
NCBI-ProteinID:
XP_012455704
UniProt:
A0A0D2UXZ7
LinkDB
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Position
10:58095095..58100764
Genome browser
AA seq
1325 aa
AA seq
DB search
MKNLKLYSEITSNLQLQSEGEVLLFSAYDIERNRFFFASSYNLIYTLHLSSLQNERAWTK
GPLQAEIDPLDLEPEDVITSFDYLMEKEALIVGTSNGLLLLHNVDGKETEVVGRVEGGVK
CISPSPDGDLLGVTTGLGQLLVMTHDWDLLYETALEDQPDGVDVREPKFPSGEMFGSPIT
WRGDGKHFATLSEVLNSSSKRLKVWERDGGAVHASSEPKELMGSILDWMPSGAKIAAVCD
RKAQNEGPSIVFFERNGLERSSFLIGEPIDATVEHLKWNCSSDLLAAVVRCGNYDSVKIW
FFSNNHWYLKHEIKYSRKDGVRFMWDPTKSQQLICWSLDGQVTVYKFFWVTAVTDESNAL
VIDGSKILVTPLPVFLMPPPMYLFSLNFPSAVREVAFYSMNGKNRLAALLSNGCLCVAEL
PTPDTWESLEGKEFSVEPCASAIPLGSFVHLIWLDPHVLLAVSHHGFNHSNCYFQPSSNE
DRLLGFYLQEIELSCSEDNVPGLLTCSGWHAKVSYRNLLEGLVIGVAPNPAKRSSAFVQF
DGGEVFEYTSKLGINKLDFKHDELRFSSSCSWMNVVLVGVTEPSKLLLFGLDDMGRLHVG
RKILCSNCSSFSFYSNLADNVITHLILATKQDLLFIVDIGDILHGELELTYENFIHVGNK
RREEENINFINIWERGAKVVGVLHGDEAAVILQTNRGNLECIYPRKLVLASIVNALNQRR
FRDALLMVRRHRIDFNVIVDYCGLQVFIQLASEFVKQVKNLSYITDFVCAIKHENVTEKL
YKKFLSPPSCKEQKDLLTNDFKGSDASLDANNKVSLVLLAIRRALDEQVPESPARELCIL
TTLARSDPPALEEALERVKVIREMELSGSDDPRQVNFPSAEEALKHLLWLSDPEAVFEAA
LGLYDLNLAAIVALNSQRDPKEFLPFLQELERMPDLLMRYNIDLRLHRFEKALKHIVSAG
DSHFFDCMNLMKKNPQLFPLGLQLITDNTKRGQVLEAWGDHLSDEKCFEDAAATYLCCTN
LQKALKAYRECGHWSGMLTVAGLMKLEKNEVLQLAHELSEELQALGKPGEAAKIALEYCG
DINGGINLLISARDWEEALRVAFLHSREDLVSVVKNAALECASSLIDEYKEGLEKVGKYL
ARYLAVRQRRLLLAAKLQSEERSINDLDDDTASEASSTFSAMSVYTKGTRKSSAASTAST
TASRARDTRRQRSRGKIRPGSPGEEMALVEHLKGMSLTARAKQELKSLLVSLVMLGEEET
ARKLQHVGENFQLPHMAAVRLADDTLSDDTINEHGHTLECYLQKVKTELKDSDAFSWRCR
VFVSP
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctgaagctttattccgagattacatcgaatcttcagttacaatcagaaggc
gaagtattactgttctctgcttacgacattgaaagaaatcgcttcttctttgcttcttcg
tataatcttatttacacactccatctttcttctctccaaaatgagcgagcatggacgaaa
ggtcctttacaagcagaaattgatccattggatttggagcctgaggatgtcattacctcc
tttgattatctaatggagaaagaagcactgatagtgggcacttctaatggactgttactg
ctgcataacgtggatggaaaggaaacggaagttgttggtcgagttgaaggtggagtcaag
tgcatttcacctagtcctgatggagacttgctaggtgtaactactggtttagggcaacta
ctggtgatgactcatgattgggatttgttgtacgagactgctttggaggaccaacctgat
ggagttgacgtacgtgaaccaaaatttccatctggagaaatgtttggcagccccatcaca
tggagaggtgatgggaagcactttgccactctaagcgaggtgttgaattcttcgagtaag
aggcttaaggtctgggaacgggatggtggagctgtacatgcttcctctgaaccaaaggaa
ttaatggggtctattctggactggatgcctagtggagcaaagattgctgccgtttgtgac
aggaaggcacagaacgaaggtccatcaatagttttctttgaaagaaatgggttagaaaga
agctcgtttctcattggtgaaccaattgacgcaactgtagaacatctgaagtggaattgc
agttctgatcttcttgcagctgttgttagatgtggaaattatgattctgtgaagatctgg
tttttcagcaacaatcattggtatctaaagcatgaaatcaaatactcgaggaaagatggt
gttagattcatgtgggatccaacaaagtcacagcaattaatttgttggtctcttgatgga
caagtcacagtttacaagttcttttgggttacagccgtcacggatgaatcaaacgcttta
gttattgatggctctaagatacttgtgacccctcttcctgtgttcttaatgccacctcct
atgtatttattcagccttaattttccaagtgctgttcgggaagtggctttttattccatg
aatggtaagaaccgcttggctgcattgttatcaaatggttgtctgtgtgttgcagagctt
ccaacacctgacacttgggaatctctagaaggcaaagaatttagtgtggaaccatgtgca
tctgcaatcccattgggatcctttgtacatcttatatggctggatccacatgtgcttctt
gctgtttctcatcatggattcaatcacagcaactgttatttccaaccctcttcaaacgag
gataggcttcttggtttctatttgcaggagatcgagctctcttgttctgaagataatgtc
ccaggtctactgacatgctctggttggcatgcaaaagtttcatatcgaaatttgttggaa
ggacttgtaatcggtgttgctcccaatcctgctaaaagaagctcagcttttgttcagttt
gatggtggagaagtttttgagtatacatctaagttgggaattaacaaactcgattttaaa
catgatgagttaaggttttcttcatcttgctcctggatgaatgtggttctagttggtgtc
actgaaccatcaaagcttttgctttttggtcttgatgatatgggtaggctgcacgtcggt
aggaaaatattatgcagcaattgcagcagtttctcattttactctaatttagctgacaat
gtaatcacacatttgatccttgcaacaaaacaagatttgctctttattgttgacatcggt
gatatattgcatggagaacttgaattaacatatgaaaactttatccatgttggtaacaaa
cgaagggaagaggagaatattaacttcataaatatttgggaaagaggggccaaagttgtt
ggtgttttgcatggagatgaagctgctgttatattgcaaacaaatcgtggaaatctggag
tgcatctatccaagaaaattggtgctagcctcaattgtcaatgctttgaaccaaagacgc
tttagggatgcacttcttatggttaggcggcacaggattgattttaatgtgattgttgat
tattgtgggttgcaagtgtttattcaattagcttccgagtttgtcaagcaggtcaaaaat
ttgagttacataactgactttgtttgtgctattaaacatgaaaatgtgacggagaaactt
tacaaaaagtttctctctccacctagctgcaaggagcaaaaggatctgttaactaatgat
ttcaagggttctgatgctagtttagatgcaaataacaaggtctcattggtgcttctggcc
ataagaagggctcttgatgaacaagtacccgaaagtcctgcaagggagctctgtattttg
accactctggctcgtagtgatccccctgctcttgaagaggctttggagagggtaaaagta
atccgggagatggagttatcaggttctgacgacccaagacaagtaaatttcccttctgct
gaagaagctctaaaacatctactgtggttatcagatccagaggctgtctttgaagctgct
ttaggtctttatgatttgaaccttgcagctattgtggctctgaactctcagcgggaccct
aaggaatttcttccctttctccaggaattggaacgtatgcctgatctcttgatgcgctat
aatattgaccttaggctgcacaggtttgagaaggctctcaaacacattgtatccgcaggt
gacagccatttctttgattgcatgaaccttatgaagaaaaaccctcaactttttcctcta
ggacttcagctgataactgataatacaaaaagagggcaagtacttgaggcttggggagat
catcttagtgatgaaaaatgctttgaagatgctgctgccacttacttgtgttgcaccaat
ttgcaaaaggctttgaaggcatatcgtgaatgtggtcattggagtggcatgctgacagta
gccgggcttatgaagctagaaaagaatgaggtattgcaactggctcatgagctttctgaa
gaactccaagcccttggtaaacctggagaagctgccaagattgctttggagtactgtggg
gatattaatggtgggattaatttgctcatcagtgcaagggactgggaagaggctttgagg
gttgcttttttgcatagcagagaggatttagtctcggtagtgaaaaatgcagcgcttgaa
tgtgcgagcagcctaatagatgaatataaagaagggcttgaaaaagtggggaaatatttg
gctcgctatttagctgttcgacaaagaaggttgctgcttgcagcaaagctgcaatcagag
gaaaggtcgataaatgatcttgatgatgatactgcttcagaagctagtagtacattcagt
gcaatgagtgtctacacaaaaggcacaagaaaaagctctgctgcttcaactgcctcaacc
acagctagcagggcaagagataccagacgtcagcgaagtagaggaaaaattcgtcctgga
agcccgggtgaggagatggctcttgtggaacatttgaaaggcatgtccctaacagctaga
gcaaagcaggaactgaagtccttgctggtttctcttgtaatgcttggtgaggaagaaact
gcacggaaattgcaacatgtgggagagaactttcaacttcctcacatggcagcagtcaga
ctagctgatgatacattgtctgatgataccataaatgagcatggacatactttggagtgt
tatctccagaaagtaaagactgaacttaaggattcagatgctttttcatggcgctgtcga
gtattcgtttctccttga
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