Gossypium raimondii: 105777378
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Entry
105777378 CDS
T04129
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105777378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105777378
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
SR proteins
105777378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
RRM_occluded
CLIP1_ZNF
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
105777378
NCBI-ProteinID:
XP_012456084
UniProt:
A0A0D2UXL0
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Position
10:complement(56545665..56549374)
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AA seq
304 aa
AA seq
DB search
MPRYDDRRGSGTRLYVGHLSSRTRSRDLEDMFSRYGRIRDVDMKRDYAFVEFSDPRDADD
ARYSLNGRDLDGSRIIVEFAKGVPRGPGGSRDYLGRGPTPGSGRCFNCGIDGHWARDCKA
GDWKNKCYRCGERGHIERNCQNSPKKLSRRPRSYSRSPSPRRGRSRSRSYSRSRSRSPVK
RERIFEREDKRSRSPKRHRGSPSPSRGRKHSPVPDERSPQEKGSPSPREGKGRLNNGSDY
SASPRGRNRSPDREADAEDKDYKNPAKEKENGQSRSPSPLPREDRSPIYDDDDNHASPRR
SESN
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggtatgatgaccgccgcggcagtggtactcgcctttatgttggtcacttatcg
tcaaggacaagatcacgtgatcttgaggacatgtttagcagatacgggagaatacgtgat
gtggatatgaagcgcgactatgcatttgttgaattcagcgaccctagagatgctgatgat
gcaagatattcattgaatggtcgagacttagatggaagccgtatcattgttgaatttgcc
aagggagtgccccgtggccctggtgggtctcgtgattaccttggaagaggccctactcct
gggtcaggacgctgcttcaattgcggaattgatggtcactgggcccgtgattgcaaagct
ggggattggaagaacaagtgttatcgttgtggagaacgaggccacatagaaagaaattgt
cagaacagtcctaagaaactaagccgtagaccccgcagttactcacgctcacctagtccc
cgccgtggtagaagcagaagccgcagttacagccgcagtagatcaagatcacctgtgaag
agagagaggattttcgagcgagaagacaaaagatcaaggagtcctaagcgccacagggga
tctccatcaccatctagggggaggaagcatagtccagtgcctgatgaaagaagcccgcaa
gagaaaggtagcccttcccctagggaaggcaagggcaggcttaacaacggttcagattac
agtgcaagtccaaggggaagaaacagaagcccagatcgtgaagctgatgctgaagacaag
gattataagaaccctgcgaaagagaaagaaaatggccagagccgcagccctagcccactc
cctagggaagaccggagccctatttatgatgatgatgataatcatgcctctcctaggcgc
agtgaatcgaattaa
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