KEGG   Gossypium raimondii: 105777732
Entry
105777732         CDS       T04129                                 
Name
(RefSeq) ubiquitin receptor RAD23b
  KO
K10839  UV excision repair protein RAD23
Organism
gra  Gossypium raimondii
Pathway
gra03420  Nucleotide excision repair
gra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    105777732
  09124 Replication and repair
   03420 Nucleotide excision repair
    105777732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gra03051]
    105777732
   03400 DNA repair and recombination proteins [BR:gra03400]
    105777732
Proteasome [BR:gra03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    105777732
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      105777732
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 CUE Rad60-SLD TECR_N UBA_3 Rad60-SLD_2 Dsc3_N Ubiquitin_2 MmeI_C UBA_RAD5A
Other DBs
NCBI-GeneID: 105777732
NCBI-ProteinID: XP_012456581
UniProt: A0A0D2RH66
LinkDB
Position
10:complement(4219372..4223621)
AA seq 362 aa
MKLIVKTLKGSHFEIRVQPNDTIMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
ENKVSEDGFLVVMLSKSKSLGSTGASSAQPASSTPSTTVPASAPSSNSTPATGAPAQASQ
QTDTYSQAASNLVAGNNLEQTIQQLMDMGGGNWDKETVTRALRAAYNNPERAVDYLYSGI
PESAEVAVPVARFSTSQTTETGAAPAAPVSGAPNSSPLNMFPQETLSGAAAGGDGSLDFL
RNNQQFQALRTMVQSNPQILQPMLQELGKQNPQLLRLIQEHHAEFLQLINEPLEGSEGDI
FDQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYLLENGGDF
ED
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgaagctcatcgtcaaaaccctaaaaggcagtcactttgaaattagggttcagcccaat
gataccattatggctgtgaagaaaaacatagaagatatacaagggaaagacaattatcca
tgtgggcaacagctgttgattcataatgggaaggttttgaaagatgaaactactttagct
gaaaataaagtatctgaagatggttttctggttgtcatgcttagcaagagcaagtctttg
ggttcaactggagcctcttctgctcagcctgcttcatcaactccatctaccactgttcct
gcttcggcaccttcttcaaattctacacctgccacaggagctcctgcacaagcatctcaa
caaaccgatacctatagtcaagctgcttcgaatttagttgctggtaataatcttgagcag
actatccaacaattgatggatatgggtggaggcaattgggacaaagaaactgtaactcgt
gcacttcgagctgcttataacaacccagagcgagcagtggattatctatattctgggatt
cctgaatcagcagaagtggcagtgccagtggctcgtttttctacaagtcagactactgaa
actggtgctgcccctgctgctcctgtttcaggggctcctaattcttctcctttgaatatg
tttcctcaggaaacactttctggggctgctgctggtggagatggatccctggatttcctc
cggaacaaccaacagttccaagcgttgcgaacaatggtgcaatcgaacccacaaattctg
cagcctatgctacaagagcttggaaagcagaacccccagcttttaagactaattcaagag
catcatgcagaatttcttcagctaataaatgagcctcttgaaggttcggaaggggatata
tttgatcaggctgaacaagaaatgcctcatgctatcaatgttaccccggcagaacaggag
gccattgagcgacttgaagcaatgggatttgatagagcccttgtgattgaagcctttttg
gcttgtgaccgaaacgaggaattggcagcaaactatttgttggaaaatggtggagatttt
gaggactga

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