Gossypium raimondii: 105777849
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Entry
105777849 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105777849
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105777849
Membrane trafficking [BR:
gra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
105777849
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
105777849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
TPR_CcmH_CycH
TPR_8
PH_SPO71
Ge1_WD40
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
105777849
NCBI-ProteinID:
XP_052481989
LinkDB
All DBs
Position
2:13330060..13341040
Genome browser
AA seq
876 aa
AA seq
DB search
MRKLSQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQSQTMAKSFEVTELPVRSAKFVA
RKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTRPYILSSSDDMLIKLWD
WEKDWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPNPNFTLDAHQKG
VNCVDYFSGGDKPYLITGSDDNTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPDLPIIITG
SEDGTVRIWHATTYRLENTLNYGLERVWALGSMKGSRRIVIGYDEGTIMVKIGREVPVSS
MDDSGKIIWAKHNEIQTVNIKSVGTNIEVTDGERLPLTVKELGTCDLYPQSLKHNPNGRF
VVVCGDGEYIIYTALAWRNRSFGSALEFIWSPDGEYAVRESTSKIKIFSKNFQEKRIVRP
TFSAEHIFGGTLLAMCSSDFICFYDWAECRMIRRIDVTVKNLYWADSGDLVAIAGDTSFY
ILKYNRDVVXSYLDSGRQVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNTSWRLNYC
VGGEVTTMFHLDRPIYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVMQGDLERA
NEILPSIPKEHHNSVAQFLESRGMIEDALEVATDPDYRFDLAMQLGKLEIAKEIATEAQS
ESKWKQLGELAMSTGKLAMAEECMKHAIGLSGLLLLYSSLGDAEGISRLASLSKEQGKNN
VVFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVTIWRKDLNRVNPKAAE
SLANPQVYPGMFENWKVALDVETRVREKRGVYPPAADYLKHADRSWLTLVEAHENGDLNH
VAAEQNGDDGSQEEAVVVDAFSETAVLFNSNEPEEE
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaactttctcaaagatcagagagagtaaaatccgtagatctccatccaacagaa
ccatggattctagcaagtttgtattctggaactctgtgtatctggaactaccagtcacag
accatggctaagtcatttgaggtcactgagttgccagttaggtcggccaagtttgttgct
cgcaaacaatgggttgttgctggagctgatgacatgtttattcgtgtatataattacaac
acaatggataaggtcaaagtttttgaggcacatactgattacattagatgtgtggctgtc
catcctactcgtccatatatattgtcatcatctgatgatatgctcataaaactctgggac
tgggagaaggattgggtgtgtactcagatatttgagggtcactctcattatgttatgcaa
gtgacttttaatcccaaagacactaacacttttgccagtgcatctctagaccgtaccata
aagatttggaatcttggctcccccaacccaaactttactttggatgcccatcagaaaggt
gtaaattgtgttgattattttagtggtggtgataagccctatctaatcaccggttctgat
gataacactgctaaggtatgggactaccaaaccaagagttgtgttcagacattggaaggt
cacacacacaatgtttctgcagtttgtttccatcctgaccttccaattatcattactggt
tctgaggacgggacagttcgtatctggcatgctaccacttataggcttgaaaatacactg
aattatggccttgaaagagtttgggcacttggatctatgaaaggttcaaggaggattgtg
attgggtatgacgaaggaactattatggtgaaaattggtcgtgaagtacctgtatcaagc
atggacgacagtggaaaaatcatatgggctaagcacaatgaaattcaaactgtgaatatt
aagagtgtagggacaaatattgaggttactgatggagaaaggttgcccttgactgttaag
gaattggggacttgtgatctataccctcaaagcttaaagcataacccaaatgggaggttt
gttgttgtctgtggagatggtgagtatatcatatatacagctttggcttggagaaatagg
tcatttggttcagcattggaattcatttggtcacctgatggagagtatgctgttagagag
agcacatctaagattaagattttcagcaaaaatttccaggaaaagaggattgtccggcca
accttctctgcagagcatatttttggaggcactttactagcaatgtgctccagtgatttt
atttgtttttacgattgggctgaatgcaggatgattcgtcgaattgatgttactgtgaaa
aatctatactgggctgatagtggtgatttggtggcaattgccggcgatacatctttctat
atccttaaatacaatcgggatgtggtttaatcttacttagatagtggaagacaagttgat
gaacaaggggttgaggatgcatttgaacttcttcatgaaaccaatgaacgggtcaggact
ggcatatgggttggggactgtttcatttacaacaacacttcatggagacttaattactgt
gttggtggagaggtgaccacaatgtttcatttggatcgtcctatctacttgttgggatat
cttgcaagccaaagtcgggtatatttgatagacaaagagtttaatgttatgggttataca
ttacttctcagcctgattgagtacaagacccttgtgatgcaaggagacttggaaagggcc
aatgaaatattaccttcaattcctaaggaacaccataatagtgtggctcagttcctggaa
tcacgaggtatgatagaggatgctctagaagttgctactgaccctgattacagatttgat
cttgccatgcagcttggcaaactagagattgctaaggaaatagccacagaagctcagagc
gagtctaaatggaagcagttgggagaattggctatgtcaactggaaagcttgcaatggct
gaggaatgcatgaaacatgcgataggcctgagtggtttattgctgctttattcctctttg
ggagatgccgaaggaatatcaaggctagcatccctttctaaagagcaagggaagaacaat
gttgttttcctttgtttattcatgctgggtaaattggaggactgcctccaacttttggtg
gaaagcaatcggatacctgaggcagctcttatggcacgatcttatcttccaagcaaggtt
tcagagatagtgactatttggagaaaagacctcaacagggttaacccaaaagctgctgaa
tctttggccaatcctcaagtgtatccaggcatgtttgagaattggaaagttgctcttgat
gttgaaactagagtgcgagagaaaaggggtgtttatcctcctgcagcagactatttgaaa
catgctgatagatcatggctgacacttgtggaggctcatgaaaatggtgaccttaatcat
gtggctgcagaacaaaatggagatgatggtagccaagaggaggctgttgttgtggatgca
tttagtgagactgcagtactttttaatagtaacgagcctgaagaagagtga
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