Gossypium raimondii: 105778089
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Entry
105778089 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105778089
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Pathway
gra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105778089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105778089
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
105778089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
UBR1-like_wing
Motif
Other DBs
NCBI-GeneID:
105778089
NCBI-ProteinID:
XP_012457135
UniProt:
A0A0D2UXJ1
LinkDB
All DBs
Position
10:complement(56300403..56306231)
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AA seq
262 aa
AA seq
DB search
MENKDNYLETSKAERSVWLMKCPGLVSRSLKAPQLSSSSSSSSASSSQAVAKVILSIDPR
VSSDDNDSSSPQFTMELVGTETGDVPKRYSMDMTKDFVPMSVFSETSQGKLAVEGKILNK
FDMRPHDENIENYGKLCRERTTKSMNKSRQIQVIDNDNGTHMRPMPGMIIAAVFNEKKKA
PAKTSDTKRTRRDRGEMEDIMFKLFERQSNWTLRQLIQETDQPEQFLKDILKDLCIYNNK
GTNQGTYELKPEYKKATDGTNP
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggataactatcttgaaacaagcaaagctgaaaggtcggtgtggttaatg
aaatgccctggattagtttcacgctctctcaaagcccctcaactctcttcttcttcttct
tcctcttctgcttcttcttctcaagcggttgccaaagttattctttccattgacccccgt
gtttccagtgatgataatgactcctcttctcctcagttcaccatggaattggttggcaca
gaaaccggggatgtaccgaagcgctattccatggatatgaccaaagactttgttccaatg
tctgtgttttctgagacttcccaaggaaagcttgcggttgagggaaaaatactgaacaag
tttgacatgagacctcatgatgaaaacatcgaaaactatgggaaactttgccgtgaaagg
acaactaaatctatgaacaaatccagacagatacaggtcatcgacaatgataatggaact
cacatgaggcctatgccagggatgattatcgctgctgtattcaacgaaaagaagaaggcg
cctgccaagacatctgatacaaaaagaacaaggagggatcgtggggagatggaagatatt
atgtttaagctctttgaaaggcaatcgaattggactttaagacaactgattcaagagaca
gaccaacctgaacaatttctgaaagatatacttaaagacctgtgtatatacaacaacaag
ggaactaatcaaggaacgtatgagctgaaacctgaatacaagaaagcaaccgatggtact
aatccttaa
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