Gossypium raimondii: 105778105
Help
Entry
105778105 CDS
T04129
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X2
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105778105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105778105
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
SR proteins
105778105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_7
RRM_9
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
105778105
NCBI-ProteinID:
XP_012457152
LinkDB
All DBs
Position
10:complement(12437043..12438528)
Genome browser
AA seq
144 aa
AA seq
DB search
MGHSSRTLYVGNLPGDTRMREVEDFFYKYGPIVDIDLKIPPRPHGYAFVEDPRDAEDAIR
GRDGYKFNGNRLRVELAHGGRRPPSSVDRYSSYSGNSRRGPSRRSDYRVLVTGLPSSASW
QNLKDHIRKAGDVCFSQVFRDREV
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgggtcattcaagccgcacgctctatgtgggcaatttgcctggggatactcgtatgaga
gaagttgaagatttcttttacaagtatggacccattgttgatattgacttgaagatccca
ccaaggccccatggttatgcatttgttgaggatcctcgtgatgctgaagatgcaattcgt
ggtcgagatggttataaatttaatgggaatcgtctaagagttgaacttgctcatggtggg
cgaagaccaccttcatctgtggatcgttatagtagttacagtggtaacagtaggcgtggg
ccttccaggcgctctgattatcgtgttttggtgactggtttaccttcttctgcttcatgg
caaaacctaaaggatcacatacgaaaagccggggatgtttgtttctctcaagtgtttcgt
gatcgtgaagtttag
DBGET
integrated database retrieval system
