Gossypium raimondii: 105778367
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Entry
105778367 CDS
T04129
Name
(RefSeq) transcription factor FAMA isoform X1
KO
K26213
transcription factor FAMA
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105778367
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105778367
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
ACT
bHLH_IRO3
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
105778367
NCBI-ProteinID:
XP_012457506
UniProt:
A0A0D2T8T8
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Position
10:complement(28938975..28941187)
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AA seq
409 aa
AA seq
DB search
MLFCYKLDFLQANFVGPDYSLDHHQHHHQHQQPRIGESCGDNNNGMVDYMLNNPQQHQHI
SSSSGFYTTPASFDKLSFADVMQFADFGPKLALNQTRIPEDETGIDPSGYFLRFPVLNDK
LEAESLMVPPSGIENVEELVEDKHGEDEARVSDNAAAQLRFFGEDDVHNRNPIAPTDPAK
NKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGG
AIEFVRELEQLLQCLESQKRRRLYGEASRQMGDTSMAAIQQQQQQQQQPVFPPMSTLPND
QMKVMEYETGLREETAENKSCLADVEVKLLGFDAMIKILCRRRPGQLVKTIAALEDLQLN
ILHTNITTIEQTVLYSFNVKVTSESGFSAEDIASSVQQIFSFIHANSSM
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttattctgctacaaacttgatttccttcaggcaaattttgtggggccagattattct
ttagaccatcatcagcatcatcatcaacatcagcagcctcggattggtgaatcttgtggt
gataacaacaatgggatggttgattatatgttgaataatcctcaacaacaccagcatata
tcatcttcatcagggttttacactactccagcatctttcgataaactgagcttcgctgat
gtgatgcagtttgcagatttcggtcctaaattagctttaaaccaaacaaggatccctgaa
gacgagactgggatcgatccttctggttatttcctaaggtttcctgttttaaacgacaag
ttagaggctgagtctttaatggttcctccatctgggattgaaaacgttgaggaattggtg
gaagataagcatggcgaagatgaagctagggtttctgataatgctgcggcgcaacttcgt
ttctttggagaagatgatgttcataacagaaaccccatagcacctacagatcctgctaag
aacaagcgaaagaggccaagaacgatcaaaaccagtgaagaagttgaaagccagaggatg
actcacatagctgttgaaaggaatcgaaggaagcaaatgaacgagcatcttcgagtgttg
agatccctcatgcctggctcttacgttcaaaggggagatcaagcctccattattggtgga
gccatagagtttgtgagagaattagagcaactccttcaatgtctagaatctcagaaaaga
agaagattgtatggagaagcttcacggcagatgggagatacatcaatggcggctattcag
cagcagcagcaacaacaacaacagccggtgtttcctccgatgtctactctcccgaacgat
caaatgaaggtaatggagtacgaaaccggactccgcgaagaaacggccgaaaacaaatca
tgcttggcggatgttgaagtgaagcttttagggtttgatgcaatgatcaagatcttgtgt
aggagaagaccaggccaactggttaaaaccatagcagctctcgaagatttgcagctcaat
atccttcataccaacatcaccaccattgaacaaacagttctatattccttcaacgttaag
gttacgagtgaatctgggttcagcgctgaagacattgcgagctcagttcaacaaatattc
agtttcattcatgcaaatagcagcatgtaa
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