Gossypium raimondii: 105778529
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Entry
105778529 CDS
T04129
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105778529
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105778529
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105778529
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_11
zf_RING_Vps8
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_Vps41
FAR1_N
zinc_ribbon_16
PHD_NSD
DUF1180
PHD
Motif
Other DBs
NCBI-GeneID:
105778529
NCBI-ProteinID:
XP_012457710
UniProt:
A0A0D2M7I3
LinkDB
All DBs
Position
1:complement(5695842..5699350)
Genome browser
AA seq
520 aa
AA seq
DB search
MGQRNMRSPIDLEIDQQGQEYLQHEPCVYLGGTTNYPSPDIPMTITAPGNTTNLDAHPLP
EHYDNSMFYGIPMYPGVQHHHHSPNLDLGIGSASNFYGPYVPTPSSSVPINHGIPDQMPS
SSNYRVHGVSADEYARNCHFMDNVRGLYKRKNSEGIPGNFQQFNASSSSSSSVTPLNTRN
RDGVGTVDAASFTRSQYRGNGLPPIREAGPQRSVRNRLGANAVDPVLMQSGNPYFQGNYL
GQPFQPTITDGGASAWTQAPGVPYMHGSNIGGPMETRHRSSSNFSHSPLDFRNPNFHHHV
PPIEGARGHGINVHPQVAPVPYCFPASYASQSTMNPSQDGLDVGRRHFGPVPPTGFRIYH
SRRESGALPESSLRHRNLPHLRVLPPDGVAVLEFPEFYEEVGNLIDHHRDMRLDIEDMSY
EELLALGERIGNVNTGLSEEIMRRKLKTRSYSTFATNINLEEAAPVEQEPDFCTICQEDY
KNQEKIGTLDCGHEYHASCLRKWLLVKNVCPICKSQALAT
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaaggaatatgcgaagccctattgatttagaaatcgatcaacaaggccaggaa
tacctccagcatgaaccttgcgtctatttgggtgggacaacgaactacccatcacctgat
atcccaatgaccatcacagctccagggaacacaactaaccttgatgcgcatcccttacct
gagcattatgacaacagtatgttttatgggatccccatgtaccctggtgttcagcatcat
catcattccccaaatcttgatcttggtatcgggagtgcctcgaacttttatggtccctat
gtgcctaccccttcatccagtgttcctataaatcatggaatcccagaccagatgccatca
tccagcaactatcgtgtccatggagtttctgctgatgaatatgcaaggaattgccacttc
atggataacgttagaggcttgtataagagaaagaattctgaagggatcccaggaaatttt
cagcagtttaatgcctcatcaagctctagctcctctgttacaccattaaatactaggaac
cgtgatggggttggcacagtggatgctgcatcctttactaggtctcaatataggggaaat
ggccttccaccaattagagaagcaggacctcaaagaagtgtgaggaacagattaggggca
aatgcagtggatcctgttttgatgcaaagtggcaacccttattttcaaggaaattacttg
ggtcaaccttttcagccgacaataacagatggaggtgcctcagcttggactcaggctcct
ggtgttccttatatgcatggtagcaatattggtggacctatggagactaggcacagaagt
tcctcaaatttctcacattctccccttgactttcggaacccaaactttcatcatcatgtg
cctcctatcgaaggagcaagaggccatggcattaatgtccatccgcaagtagcaccagtt
ccttattgctttccagcaagttatgcttcacagagcaccatgaatccctcacaggatggt
ttggatgtcgggcgtaggcattttggaccagttccacctactggctttaggatatatcat
tctcgccgggaaagtggtgctttacctgagtcatctctgagacaccgcaatcttcctcac
ctgagagttctcccacctgatggagttgccgtacttgagttcccagaattttatgaagaa
gttggcaatcttattgatcatcacagagatatgcgcttggatatagaggatatgtcttac
gaggagttgctcgctctgggagagcggattggcaatgtgaacaccggtttatcagaagaa
atcatgagacgtaaattgaaaacaagatcgtattcgacattcgctacaaatattaatctg
gaagaagcggcacccgttgaacaggaacctgatttttgtacaatttgccaggaggattat
aagaaccaagagaaaatcggaacccttgattgtggacacgagtaccatgcaagttgctta
agaaagtggctgctcgtgaagaacgtatgccccatatgcaaatcacaggcattagccaca
taa
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