Gossypium raimondii: 105778802
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Entry
105778802 CDS
T04129
Name
(RefSeq) amino acid transporter AVT1D
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
gra
Gossypium raimondii
Pathway
gra04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105778802
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105778802
Transporters [BR:
gra02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
105778802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
105778802
NCBI-ProteinID:
XP_012458015
UniProt:
A0A0D2V3X5
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Position
4:complement(11870283..11873303)
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AA seq
527 aa
AA seq
DB search
MKIDEDLGLDREDAFQTDDEENRAERVCCHVEDDTESDFTFPSRNSSNNCIGANNSKWPQ
SYRKSMDMLKGTTPQSLSFLKRSGATGSMGSSSCNNDESSLGTPLIFDTILDEEVHTPIL
LTSEQSVSVNGSIPSEKQCSFTQALINGINVLSGIGLLTTPYAVKEGGWLSLTLLIIFGI
IACYTGVLLKRCLESSPGLQTYPDIGQAAFGVAGRLMISVILYAELYAACVEYVIMMSDN
LSMIFPTTNIHFAEIYLDAPQVFAIIGTLIILPTVWLRDLSLLSYISVGGVGASILMVLC
LLWVGVDQVGFHRGGTAVNLANLPISVGIYSFCYAGHSVFPNIYSSMREPSLFPFVLIGS
FMFCWTVCTGVAISGFLIFGDSVESQFTLNMPMKFLASKIAVCTVVIITVSKYALTLTPI
ALSLEELVSSTWFRSYGVSILIRTALVISTLVVAMTVPFFAFVMALAGSLLAMLITIIFP
CACYLSILGDRLNKLQITACICIAVLGLVIACLGTYSSIIRIVGRLD
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagatgaggatcttggtttagatcgagaagatgcattccaaacagacgacgaa
gaaaatcgagctgaaagggtatgttgtcacgttgaggatgacacagaatctgatttcact
ttcccttcccgaaattcctccaataattgcattggagccaacaattccaaatggcctcaa
agttacaggaaatcaatggatatgcttaaaggtactacgccgcagtcgcttagtttctta
aagagaagtggtgcaacaggatcaatgggcagttccagctgtaacaatgatgagtcttcc
ctgggtactccactcatttttgataccattttagatgaagaagtgcatacccctattctc
ctaacttcagagcaaagtgtttctgtcaatggatcaataccatcagagaagcagtgttca
tttacccaagcacttattaatggaatcaatgttctgtccggcataggactccttacaact
ccttatgcagtgaaagaaggagggtggttaagcctcacattactcataatatttggtatc
attgcttgttatactggggttttattaaaaagatgtttagaaagctctcctggtctacaa
acttatcctgatatcggacaggccgctttcggtgtagccggtcgcttaatgatatctgtg
attttgtatgcagaattatatgcggcgtgtgtggagtacgtaataatgatgagtgataac
ctttcgatgattttcccgaccaccaacatacattttgcggaaatatatctggatgctcct
caagtatttgctatcataggaactctcattattctcccaactgtttggcttcgagacctt
agcttgctctcatacatttcagttggtggagttggggcatcaatcttaatggtgctttgc
ttgttatgggttggagtcgatcaggtcgggtttcatcgaggtggaactgctgttaacctt
gcaaaccttcccatctcagtaggaatatacagcttctgctatgccggccattccgttttt
ccaaatatatattcttccatgagagagccctcactttttccttttgttcttataggcagc
tttatgttttgttggaccgtttgcacaggagtagctatctctggctttctcatatttggt
gattcagttgaatctcaatttactctaaacatgcccatgaaattcttggcctcgaaaatc
gcagtctgcactgtggttatcataacggtatcaaaatatgccttgacacttacgcccatt
gctttgagtctagaagaacttgtatcctccacatggtttagatcttatggtgtttctata
ctcataagaacagctttagtgatttcaactttagtggttgcaatgacggttccctttttt
gcttttgtgatggcattggcaggatctttgcttgcaatgctgattactatcatctttcca
tgtgcctgttatctcagcatacttggcgatagattaaacaagttacaaataacagcctgc
atttgcattgctgttctaggactggtaatcgcttgtcttggtacatattcttcgatcata
agaatagttggccgactcgattga
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