Gossypium raimondii: 105779190
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Entry
105779190 CDS
T04129
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105779190
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105779190
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
105779190
NCBI-ProteinID:
XP_012458404
UniProt:
A0A0D2VVS4
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Position
4:complement(43668375..43673778)
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AA seq
466 aa
AA seq
DB search
MSTSSQPQFRYTQTPSKVLHLRNLPWECAEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNKSPGDTPGNVLLVTIEGVE
PNDVTIETIHLVFSAFGFVHKIATFEKAAGFQALIQFTDAETASSARNALDGRSIPRYLL
PDHVTSCYLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGLMQPVVGPDGKKQEP
QSNVLLASIENMQYAVTVDVLHTVFSASGMVQKIAIFEKNGGTQALIQYPDVTTAAVAKE
SLEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTISDPSLLATQVPGLPAAPNAWQ
NPQGVPVHHGTDYSASAAIQGQPLAGQLPAWDPNFQARLPYGSVPGQTYQSLTAPTYVNV
ARPAGSSPLSQPGASSMPMQQQQQPPWANVRQGGAAELGQPPYYSR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatcaagccaacctcagttccgttatacccagacgccatcgaaggtcctccat
ctccgtaatctcccatgggagtgtgcggaagaggaactcgtcgaactttgtaaacccttt
gggaagatcgttaatactaaatgcaatgttggcgccaatcgaaaccaagcttttgttgaa
ttcgcagacttaaatcaggctatttcaatggtttcatactatgcttcatcatcagaacca
gcacagattcgtggaaaaactgtgtatattcaatattcaaacagacatgaaattgtcaac
aacaaaagtcctggagatacccctggaaatgtgttgctggttaccattgagggtgtggaa
cctaatgacgtgaccattgagaccattcacttggtattttctgcatttggttttgtgcac
aagattgctacttttgaaaaggctgctggattccaggcattaatccaattcactgatgct
gaaactgcatcttcggcgaggaatgcattggatgggagaagtattcccaggtacttgctt
ccagatcatgttacttcttgttacctgagaatctcatattcagcacacactgatctgaat
atcaagtttcagtctcatcggagcagggactataccaatccttaccttcctgtgaatcct
actgcaatggaaggacttatgcagcctgtagttggtccggatggaaaaaagcaagaacct
cagagtaatgtgctacttgcttcaattgaaaatatgcagtatgctgtgacagttgatgtt
cttcacacggtgttctcagcatctggcatggtccaaaagattgccatatttgagaagaat
ggtggaacacaggcacttattcaatatcccgatgttacaaccgcagcagttgccaaagaa
tccttagagggacactgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcatacagtgataaaagtagagattacacaatctca
gacccgagtttgcttgcaacacaagttccgggattgcctgctgctccaaatgcttggcag
aatcctcagggtgttccggtgcaccatggtactgactattcggcttcagctgcaatacag
ggtcaacctcttgctggacaacttcctgcttgggatccaaattttcaggctaggctgcca
tatggatcagttcctggtcaaacatatcaatcgttgacagcccctacatacgttaatgtg
gcaagacctgcaggttcatcacccctttcacaacctggtgcatcttccatgcccatgcag
cagcagcagcagccgccatgggctaatgttagacaaggaggtgcagcggagctgggtcag
cctccttattacagtcgatga
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