Gossypium raimondii: 105779239
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Entry
105779239 CDS
T04129
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
gra
Gossypium raimondii
Pathway
gra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105779239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105779239
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105779239
Prokaryotic type
Archaeal type
TFB
105779239
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
RB_B
HTH_11
Cyclin_N
Sigma70_r4
Phage_terminase
Motif
Other DBs
NCBI-GeneID:
105779239
NCBI-ProteinID:
XP_012458462
UniProt:
A0A0D2VVM6
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Position
4:complement(44190882..44191832)
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AA seq
288 aa
AA seq
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MASSFCSTCEIDTETIIDHRAGYNLCSRCGSVLEISPFDEIPDLPIFSDSDENYDEFEYP
LFEIDMSTWGPSLNPKDQKKVKTPLKKSLKLLAVMGDRLRLTKELKERAAEIYNIVDDYR
TCRGRSLNSIVAACFFIACKESGSSRTLSEIAKAADGVSRKSINRTAESIKKQLEVETWK
VQPGDLIERLCSNLGLRNQAIKAVKEAVERTEYLDIRRSPKTVLAAIIYMVIQLSHDKEP
APVKDIAKVMEVTEITIRKSFKDISIFGSKLIPDWYAKEEDIKKIPVP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagcttctgttcaacctgtgaaatagacactgaaactattattgatcatagg
gctggctataatttatgttctcgatgcggctcggttcttgaaatcagcccgtttgatgaa
attcccgacttgccaatcttctcagattctgatgaaaattacgatgaatttgaataccca
cttttcgaaatcgatatgtcgacttggggtccgagcttaaaccccaaagatcaaaagaag
gtcaagactccattgaagaaaagcttgaaactgcttgcagttatgggggacaggttaagg
ttgacgaaagagctcaaagaaagagctgctgagatatacaacatagtcgatgattataga
acgtgtagaggacgaagcctaaattccattgtcgcggcttgctttttcattgcttgtaaa
gaaagcggatcttctcggacgttgagcgaaatcgctaaggcggcggacggagtgtcgagg
aagagcattaatcgaaccgccgaatcgataaagaaacagctggaagtggagacctggaag
gtgcagcccggcgacctcatcgaacgattgtgttcgaatctcggactgagaaatcaagcc
attaaagcagtcaaagaagctgttgaaagaacagaatatcttgacataaggaggagtcca
aaaacagttttggctgccattatttacatggtaatccagcttagccatgacaaagaacca
gctccggttaaagatattgcaaaggtaatggaggttactgagattacaatcaggaaatca
ttcaaggatatttcaatttttggatcaaagctgatacctgattggtatgctaaggaagag
gacatcaagaaaattcccgtcccttga
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