KEGG   Gossypium raimondii: 105779277
Entry
105779277         CDS       T04129                                 
Name
(RefSeq) RING-H2 finger protein ATL78
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
gra  Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:gra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105779277
Enzymes [BR:gra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     105779277
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    105779277
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-C3HC4_2 zf-RING_5 zf-ANAPC11 zf-RING_UBOX zf-RING_16 zf_RING_Vps8_fungal PHF5 FANCL_C zf_RING_Vps8 Prok-RING_1 RINGv TMCCDC2 zf-C3H2C3 zf-RING-like Zn_ribbon_IFT122_C
Other DBs
NCBI-GeneID: 105779277
NCBI-ProteinID: XP_012458492
UniProt: A0A0D2RWS2
LinkDB
Position
4:46854504..46855403
AA seq 204 aa
MTTSITSTLFSQDLYPRKFLLHSSLHPIESPAISPAQQNNSPINDNFHSNATIILLVLIC
TIISFLGLFCMVKCAIRGSSSVASESGVNPLAKLANKGVERKALNSFPTIKYATELKLTS
LDTACAICLSEFAAEERLRILPKCNHGFHTQCIDNWLSSHSSCPTCRHCLIETDQKTDNC
SPIGSLEQPLPVQESIINVNVEEN
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacaacttcaataacatcaacccttttctcccaagacttgtatccaagaaaatttctc
ctacattcctctcttcaccctatagaatcccctgcaatttccccagctcaacaaaacaat
tcccccatcaatgacaacttccattcaaatgcaaccattattctcttagtcctcatttgc
accatcatttcctttttggggttgttttgtatggtcaagtgtgcaattagaggctcaagt
tctgttgcttctgaatctggtgtaaaccctttagccaagttagctaataaaggagttgag
aggaaagccttaaattccttccctaccataaaatacgcgaccgagttgaaactaaccagc
ctagacaccgcttgtgccatatgcttgtcggagtttgctgctgaggagcgtctgcggatt
ttgccaaagtgcaaccatggatttcatactcaatgtatcgacaattggcttagttcacat
tcttcatgccctacatgcaggcactgcctgatagaaacagatcaaaagaccgataactgc
agcccgataggttccttggaacagcctctgccggtgcaagaaagcatcatcaacgttaac
gtagaagagaactga

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