Gossypium raimondii: 105779283
Help
Entry
105779283 CDS
T04129
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105779283
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105779283
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
105779283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING-like
zf-RING_16
FANCL_C
zf_RING_Vps8_fungal
COX2_TM
Motif
Other DBs
NCBI-GeneID:
105779283
NCBI-ProteinID:
XP_012458495
LinkDB
All DBs
Position
4:46804844..46805734
Genome browser
AA seq
215 aa
AA seq
DB search
MHSISTSSTSSQPLQGFLGNFHSRKLLLNYTQSNQSSAPPPYTQNSSFDQNVLMVLSVIL
LGFIFSLGLNLIIRCVLRCSNGADSESIDNSSTAIVNIGIETKALKTFPVVNYSAEMNLP
GLDSECLICLSEYTAGERLRFLPKCNHGFHVRCIDKWLKSHTSCPKCRHCLLETCQKIMG
CNQSSSLESCVPAQDCVVNIQPLEPEGVVRDIRGG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaatttcaacttcttctacttcatctcaacccttgcaaggttttcttggaaac
tttcattccagaaaattactgttaaattacacacaatcaaaccaatcatcagctcctcct
ccttacactcaaaattccagttttgatcaaaatgttttgatggtactttcagtcatcctt
cttgggttcattttttcattggggctaaacttaataatcagatgtgtgctaaggtgctca
aacggggcggattcggagtccattgacaactcttctactgcaatagtcaatatcggaatc
gagacaaaggcactcaagactttccctgtggtgaattactcggcggagatgaatctgcca
gggctggactccgaatgtctgatatgcctgtcggagtatacggctggcgagcgcctgcgg
tttctaccgaaatgcaaccatggatttcatgttcgttgtattgataaatggcttaaatca
cacacatcatgccccaaatgcaggcattgtttgcttgaaacatgccaaaaaatcatgggg
tgtaatcagagtagctcattagaatcatgcgttcctgcacaggactgcgttgtgaatatt
caaccactagaacctgaaggtgtggtgcgtgatattagggggggttag
DBGET
integrated database retrieval system
