Gossypium raimondii: 105779412
Help
Entry
105779412 CDS
T04129
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
gra
Gossypium raimondii
Pathway
gra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105779412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105779412
03029 Mitochondrial biogenesis [BR:
gra03029
]
105779412
Membrane trafficking [BR:
gra04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105779412
Atg1 complex
105779412
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105779412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
105779412
NCBI-ProteinID:
XP_012458601
UniProt:
A0A0D2THL0
LinkDB
All DBs
Position
4:complement(46779873..46785189)
Genome browser
AA seq
658 aa
AA seq
DB search
MASSHSNTHTEAAKLEQIITEFFYKSLLIILESRSPYVSSRNYSGEQIMSSPSSSSSSSS
GVRPRDKWFNLALRECPSALENFDLCRQSNFEPVVVDVILEQKQLDWDPVTFSPKSDLVK
HSSSKDKNSFFWNSDQEESGCEAKGEKVIERWFVQHESRKGRDCSSGSRRSSSNNLSALY
KKLILLLRSLYVTVRLLPAYKIFRDLNSSGQIRAFKLVPRVSSSVESFTQKEEAEMQRFW
FTPVDTSCGRLCLSVLYRSSISDISSESSTPMSPQFIPDYVGSPLTDPLRRFPSLPVSQG
SPSSLPFSRRHSWSFDRYKASPPSVSFSPSPTHSESHALVSNPSSRRAPPMSLPPHPPGA
SLPHKKNTNFDEYWPSPNFSASPSPSPSPSPSPSPPIRIPGGHLSKALLRSESAPVNIPV
RKLAGSPALSCKQNLPPSPPLKISRADISWTDNNMGPMKSGATIEKLFSFGKGDGQKYSG
VNSPRTSFFRSSSRSIQDDFDDSEVPCPFDVEYDDMDPGSRPESYDRRGNPSDPNEAGLF
MNRKSQDAAVGALVQMLKKAPPLRQDIPSSINFSEASRPEMWNNNIQEQNQNTEAVTVEH
DASSIITSSRLVASMTTADALEELRSYKEMKNLLLSEGGKSCISANLTSGAKHSGEGT
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatctcatagcaatactcacactgaagccgcaaaattggaacaaatcatcact
gaattcttctataagagtcttctaattatacttgaatcgaggtctccttatgtgtcatcg
cgaaattatagtggtgaacaaattatgtcatctccatcttcgtcctcatcatcttcctca
ggtgtgagaccaagagataaatggttcaatttagctcttagggagtgcccttcagcacta
gaaaattttgatctttgtcgccagagtaattttgagccggtagtggttgatgttatcttg
gagcagaagcaacttgattgggatcctgtaaccttttcccccaaaagtgatcttgttaag
cattcttcatcaaaagataagaactcatttttctggaattctgatcaagaagaatcaggc
tgtgaggcaaaaggtgagaaggttatagaaaggtggttcgtgcagcatgaaagtagaaag
ggtagggattgcagttcagggagtagaaggtcaagtagtaataatttgagtgcattatat
aagaaattgatattgctgttgaggtccttatatgtgactgttaggcttttacctgcgtac
aagatttttcgtgatctcaattcatctggtcaaatccgtgcttttaagcttgttcctagg
gtatcctcttctgttgaatctttcactcagaaagaagaggccgaaatgcagcgattttgg
ttcacccctgtggatacttcttgtggaaggctttgcctttcagttttgtaccgttcatca
atctcagatataagctccgagtcatcaacccctatgtcccctcaatttataccagattat
gttggaagcccattgacagacccactgagaagatttccttctcttcctgtgtcacagggc
tctccatcatctttgccattctcaaggagacatagttggagttttgatcgttacaaggct
tcaccgccttcagtttctttctcaccatccccaacacattcggaatcacatgctttggtt
tctaacccaagctctcgccgtgcgccacctatgagcttacctcctcatcctcctggggca
tctctacctcataagaagaatacaaactttgatgagtattggccttcccctaatttttct
gcttccccttcgccatccccatccccttccccctcgccatcacctcccatccgcattcct
gggggtcatctgtcaaaagctcttttacgttctgaaagtgctcctgttaacatacctgtc
cgtaagcttgctggttcccctgcattgtcctgcaagcaaaatctgccaccatctcctccc
cttaaaatttcaagagctgatatttcttggactgataataatatgggtcccatgaaatct
ggcgcaactatcgagaagctgttctctttcgggaaaggagacggtcagaaatattctgga
gtgaactcacccagaacttcatttttcagaagctccagtaggtctatacaagatgatttt
gatgactctgaggttccttgtccatttgatgtggagtatgatgatatggaccctggtagc
aggcccgagtcctatgatagaagaggaaatccatctgatccaaatgaggcagggttgttt
atgaatagaaaatcccaagatgctgcggttggtgctcttgtacagatgctgaagaaagcc
cctccacttcgccaagacatcccaagttcgataaatttttcagaagcctcgaggccagaa
atgtggaataacaacatccaagagcaaaaccagaacacagaggctgtgaccgttgaacat
gatgcttcttcaattattacatcttctaggcttgtcgcatcaatgacaacggcagatgca
ttagaggaacttcggagttacaaagagatgaaaaacttgttgcttagtgaaggtggtaag
tcttgcatatctgccaatttaacctctggggctaaacattctggcgaaggtacatga
DBGET
integrated database retrieval system
