Gossypium raimondii: 105779466
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Entry
105779466 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105779466 isoform X2
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gra03016
]
105779466
Enzymes [BR:
gra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
105779466
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105779466
Prokaryotic type
105779466
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
105779466
NCBI-ProteinID:
XP_012458686
UniProt:
A0A0D2V2T7
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Position
4:complement(41344472..41348385)
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AA seq
511 aa
AA seq
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MSLHLLRPKILYFFTAIGSSRLLSSKSCNFTNKLIFSKQPFSSFFFSTTSTPYPLQYDMI
INTPTQSQPTPTRRRLSKPDSPNSPEEEDPEKELGFDSWVQKKLTSEEEMDKSKRKYYKK
RRKRMYGSDSEDDDKGKNEDGFVELKPKVVEFDRLHEREEELYFYDTFAYPWENDKHYKM
VYQLEKKYFPDQCFDKAFLEPGESNEKIKIKGKSKKTDDNNKKNNKVEDKGLVFFEEEEN
SGEDVKEKVTEKKVEEFFKCLKKVPNKETDDGEPYLVSRSTGLPTRWDGPYGTVVLVNKP
KGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGKATKLVERYQGMVKGYSGVF
RLGEATSTWDADSPVIQREPWEQIKDEDIKKAAASFCGEIWQVPPMFSAIKVGGERMYEK
ARKGETVELSPRRISIFHFDIERSLEDRQNLIFRVTCSKGTYIRSLCADFGKALGSCAHL
TALRRDSIGEYSAEDAWEFKELEEAITKGYF
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcatttgctacgtccaaagatcctatatttctttacagcaattgggtctagt
cgtctcttatcatcaaaatcctgtaatttcaccaacaaattgatcttttcaaagcagcca
ttttcttcatttttcttctccacaacatcgactccttaccctcttcaatatgacatgatc
atcaacaccccgactcagtcccaacctaccccaactcgccgccgactcagtaaaccagac
tcgcccaactcacctgaggaagaggacccagaaaaagaattgggttttgattcatgggta
caaaagaaactgacttcagaagaagaaatggataagtctaagaggaaatattataaaaag
agaaggaaaagaatgtatggttcagattctgaagatgatgataaggggaaaaatgaagat
gggtttgttgaattgaagcctaaagttgtggaatttgataggctacatgagagggaagaa
gagctctacttttatgatacatttgcctatccttgggaaaatgataaacattataaaatg
gtttatcaattggaaaagaagtattttcctgaccagtgttttgataaagcttttcttgag
cctggagaatcaaatgagaaaatcaaaattaagggaaaaagtaaaaagactgatgataat
aataagaagaataataaggtggaggataaagggttggtgttttttgaggaagaagaaaat
tcaggtgaggatgtgaaggagaaggttactgagaagaaggtggaggagtttttcaagtgt
ttgaagaaagttcccaataaagaaaccgacgatggggagccttaccttgttagtaggagt
actgggctccccacgagatgggatggtccatatgggacggtagttttggtgaataagccc
aaaggatggacctcatttaccgtttgtggcaagctgcgccgcttagtcaaagtgaaaaag
gtagggcacgctggaacacttgatcctatggcaactggtctattgattgtatgtgttggt
aaagccactaagttggtagagagatatcaaggaatggtaaagggatacagcggagttttc
cgattaggggaggctacttcaacttgggatgctgattcaccggttattcaacgtgagcct
tgggagcagatcaaagacgaggacataaaaaaagctgctgcatccttctgcggagagata
tggcaagttcctccaatgttctctgccatcaaggttgggggtgaaaggatgtatgaaaaa
gcaagaaaaggggagaccgttgaactttcacccagacgaatttcaattttccactttgac
attgagcgtagcttagaagacagacagaacttgattttccgagtcacatgttcaaaagga
acatatatccgatcattatgtgcagattttgggaaggctttgggcagttgtgctcatttg
acggctctgcgaagagattcaattggggaatattcagcggaggatgcatgggagttcaag
gaactagaagaagcaatcactaaaggttatttctag
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