Gossypium raimondii: 105779595
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Entry
105779595 CDS
T04129
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
gra
Gossypium raimondii
Pathway
gra04142
Lysosome
gra04144
Endocytosis
gra05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105779595
04142 Lysosome
105779595
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
105779595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105779595
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105779595
Membrane trafficking [BR:
gra04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
105779595
Exosome [BR:
gra04147
]
Exosomal proteins
Proteins found in most exosomes
105779595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
105779595
NCBI-ProteinID:
XP_012458865
UniProt:
A0A0D2RZH3
LinkDB
All DBs
Position
4:complement(38003048..38014168)
Genome browser
AA seq
1701 aa
AA seq
DB search
MAAANAPIAMKEVLTLPSIGISPQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQLPGTTQDHLQIFNIEMKAKMKSHQMPEQVVFWKWI
SPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLVNNQIINYKCDPSEKWLVLIGIAPGA
PEKPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFATKSFNAGQITS
KLHVIELGAQPGKPSFSKKQADLFFPPDFQDDFPVAMQISHKYGLIFVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTSEASAAGGFYAINRRGQVLLATVNEATIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFTHYDRPRIAQLCEKAGLFVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSATVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRASEDADVYSDLVRYLLMVRQKVKEPKVDSELIYAYAKTDRLGEI
EEFILMPNVANLQNVGDRLFDEALYEAAKIIFAFISNWAKLAVTLVRLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRAEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDLINDMLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFAACLFVCYDLIRPDVALEMAWVNNMIDFTFPFLLQFIREY
TGKVDELIKDKIEAQKDVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
MGGGMGMPPMPPYGMPQMGSY
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaaacgctcccatcgccatgaaggaggtcttaactttgccaagcattggc
attagtcctcaatttatcacattcacgaacgtaactatggaatctgataagtatatttgt
gtgagagaaaccgcgccgcaaaacagtgttgtgattatcgatatgaacatgccgatgcag
ccgttgagacggcctattacagcggactccgctcttatgaatccgaattctagaatcctt
gctttgaaagctcaactaccgggaacaactcaagatcatttgcaaatatttaacatagag
atgaaagcaaaaatgaaatcccatcagatgcctgaacaggttgtattttggaaatggatt
agcccaaaattgcttggcctggtaacacagacctctgtgtatcattggtcaattgaaggt
gattctgaaccagttaagatgtttgagagaacagctaatttagtgaacaatcagatcata
aactataagtgtgacccttcggagaagtggttggttttgatcggaattgcccccggtgca
cctgagaagccacaattggttaaggggaacatgcaacttttctctgttgatcagcagcgt
agtcaagctcttgaagcacatgctgcttcatttgctcagtttaaggttccaggaaatgag
aatccttctattcttatttcatttgccactaagagttttaatgccggtcagattacatca
aagttgcatgtaattgagcttggtgcccaaccaggtaagccatcgttttcaaagaaacaa
gcagatctatttttcccgccagattttcaagatgattttccagttgcaatgcagatatcc
cacaaatatggtttgatctttgttatcaccaagcttgggctgctgtttgtttatgattta
gagacagcatctgctgtatacagaaatagaatcagtccagatccaatatttttaacatct
gaagcttcagcagctggagggttttatgccataaataggcgaggtcaggtgttgttggct
actgtaaatgaagcaacaatagtgccatttgttagtggtcaattgaacaatttggagctt
gctgtcaatctggctaaaagaggaaaccttccgggtgcagagaacttggttgtccaacgt
tttcaagaattgtttgctcagacaaagtataaagaagctgctgagcttgctgcagagtct
ccacaagggatacttcgcacacctgatacagttgccaagtttcagagtgtccctgtgcaa
gctgggcagactccgccactgttgcagtactttggtacccttttaacaaggggaaagctc
aatgcatttgagtcattggaattatctcggcttgtggtgaaccaaaacaagaagaacctt
ctggagaattggttggctgaagataaattggaatgtagtgaggaacttggagaccttgtg
aagactgtggataatgatcttgcgctgaaaatatatattaaagctagggcaactccaaaa
gtagttgcagcttttgctgaacgtagggagtttgacaagatcttgatttactcaaagcag
gttgggtacactcctgactacttgttccttctgcaaacaattctccgtacagatccacag
ggagctgttaactttgcattgatgatgtctcaaatggagggaggttgtccagttgattac
aacaccatcaccgatctttttcttcagaggaatttgatacgggaggctactgcatttcta
ttagatgttttgaagccaaatctgccagagcatgcttttctacaaacgaaggtcttggaa
atcaatctagtaacttttccaaatgtagctgatgccatcttagcaaatggaatgttcact
cactacgatcgtccccgaattgcacaactatgtgaaaaagctggtctctttgtgcgagct
cttcagcattacactgagttgcccgatattaaacgtgtcatcgtgaatacacatgctatc
gagccacagtcacttgttgaattttttggaactctttcacgagaatgggctttggagtgc
atgaaggaccttttgttggttaatctaagaggcaatcttcaaataatcgttcaggttgcc
aaggagtactgtgagcagttgggtgttgatgcttgcataaaactttttgagcaatttaag
tcatatgaaggattgtactttttcctgggctcctatttgagctcaagtgaggatcctgat
atacactttaagtacattgaggcagctgctaaaactggtcaaatcaaggaggttgagcgt
gtaaccagggaatcaaatttttatgatgctgaaaagacaaagaacttcctaatggaggcc
aagcttcctgatgcaaggcccctaattaatgtttgtgatcgatttgggtttgttcctgat
ctcactcactacctctacacaaataacatgctccggtacattgaagggtatgttcagaag
gtgaacccagggaatgctcctttggtagtggggcaattgctagatgatgaatgccctgaa
gattttataaagggtctcattctctcagtccgttctctgcttccagttgagccccttgtg
gaggaatgtgagaaaagaaatcgccttcgtttgcttacacagtttttggagcatcttgtg
agtgagggaagccaagatgtgcatgtccacaatgctctgggaaaaatcatcattgacagc
aataacaatccagagcacttcctcacaaccaatccttactatgattctagggtggttggt
aagtactgtgagaagcgtgatcccactctggcagttgtggcctacagaagaggacaatgt
gatgatgaacttataaatgtcactaataagaactcattgttcaaattgcaggctaggtat
gttgtcgagaggatggatggtgatctttgggagaaggttctaaatcctgaaaatgaatat
agaagacagctaattgatcaggttgtgtcaactgctttgccagaaagcaagagtccagaa
caagtttctgcaactgttaaagctttcatgacagctgacctgccccatgaactgattgag
cttcttgagaagattgtgctccaaaactctgcattcagtgggaacttcaatctgcaaaat
ctacttattttgacagctattaaggcagatccatctagagtcatggattatatcaatagg
ctagataattttgatggacctgcagttggagaagtggctgtggaagcccaactatatgaa
gaagcttttgcgattttcaaaaagttcaacttaaatgttcaggctgtcaatgttttattg
gataacattagaagcattgatcgggcagtggaatttgcatttagagtcgaagaagatgct
gtttggagtcaggtggcgaaggcacaactgagggaggggctggttagtgatgcaattgaa
tcatttattcgtgcagatgatgctactcagttccttgatgttatcagagcttctgaggat
gcagatgtctactctgatctggtgaggtaccttctgatggttaggcagaaggtcaaggag
cccaaggtggacagtgaactcatttacgcctatgctaagactgatagactgggagaaatt
gaagaattcattctcatgccaaatgttgctaatcttcaaaatgttggtgatcgcttgttt
gatgaagccctatatgaggccgcaaaaataatatttgcttttatatcaaactgggccaag
ttggctgttacactggtgaggcttaaacaattccagggtgctgttgatgcagcacgaaaa
gcaaacagtgccaagacatggaaagaggtttgctttgcttgtgttgatgcagaggaattc
cgattggcacagatatgtggtctgaacgttattatacaggtggatgacttggaagaagtc
agtgaatactatcagaatagaggatgcttcaatgagttaatctctctcatggagagtggt
ttaggattggaacgtgcacacatggggatctttactgagttgggagttctgtatgccaga
tatcgtgcagagaagcttatggagcacattaagttgttctctactcgtctcaatattccc
aagctgataagagcatgtgatgagcagcagcactggaaggaacttacctacttatatatc
caatatgatgagtttgataatgctgcaactactgtgatgaaccactctcctgaggcatgg
gatcatatgcagttcaaagatatcatagtcaaagttgctagtgttgagctatattacaag
gctgtccacttttacttgcaagagcatcctgatctcatcaatgatatgctgaatgtgctt
gcgcttcgtgtggatcatactcgtgttgttgacattatgagaaaggccggtcatctgcgt
ctggtgaagccatatatggttgctgttcagagcaacaatgtatcagcagtaaatgaagcg
ttgaatgagatttatgtagaggaagaagattatgatagattgagagaatctattgacttg
catgataactttgatcagattggccttgctcaaaagattgagaaacatgagctgcttgag
atgagacgtgttgctgcatacatatacaaaaaggcgggcagatggaagcagtccattgcc
ttgtcaaagaaagacaacctttacaaagatgctatggaaactgcttcacagtctggtgac
cgtgaacttgctgaggagttgcttgtttacttcattgagcagggcaagaaggaatgtttc
gcagcgtgcctctttgtctgttatgacttaattcgaccagatgttgctcttgaaatggcc
tgggttaacaatatgatagacttcacattcccgttcctgttgcagtttatccgtgaatat
accggcaaagttgatgaacttatcaaggataagatcgaggctcaaaaggatgtaaaggct
aaagagcaagaagagaaggaggtcattgcacaacagaacatgtatgcgcagttgctacct
cttgccttgccagcacctccgatgccaggcatgggaggaggttttgctcctccaccacct
atgggaggaggaatgggaatgcctccgatgccaccatacggcatgccacaaatgggcagc
tattaa
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integrated database retrieval system