Gossypium raimondii: 105779770
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Entry
105779770 CDS
T04129
Name
(RefSeq) isoamylase 1, chloroplastic isoform X1
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gra
Gossypium raimondii
Pathway
gra00500
Starch and sucrose metabolism
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
105779770
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
105779770
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Gene cluster
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
pulA_all-beta
GHL10
Motif
Other DBs
NCBI-GeneID:
105779770
NCBI-ProteinID:
XP_012459147
UniProt:
A0A0D2VTZ5
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Position
4:49729722..49751409
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AA seq
789 aa
AA seq
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MDLIRCTSCFQHSPTLIAPTFRHRTTPKPNLTTISNNHATVSTTRMVVKARGGGAAEAET
ALVDKPKVLKRFQVSDGHPAPFGATIQDGGVNFAIYSANATSATLCLIALSDLQQNRVTE
QIPLDPLANKTGDVWHVFLKGNFKDMLYGYIFDGEFSPEIGHYYDSSRILLDPYAKAVIS
RGEFGALGPEDNCWPQMAGMVPTSEDQFDWEGDLPLRHPGRDLIIYEMHVRGYTRHESSG
TKFPGTYCGVVEKLDHLKELGVNCIELMPCHEFNELEYYSYNSVLGDYKLNFWGYSTINY
FSPMIRYSSSGIRSCGRDAINEFKYLVKEAHKRGIEVIMDVVFNHTAEGNEKGLSVSFRG
VDNCVYYMLAPKGEYYNYSGCGNTFNCNHPVVRQFILDCLRYWVAEMHVDGFRFDLASIM
TRSSSLWDSVNVYGDPLEGDLITTGTPLSNPPLIDMMSNDPVLHGVKLIAEAWDAGGLYQ
VGRFPHWGVWSEWNGKYRDIVRQFIKGTDGLSGAFAECLCGSPNLYQKGGGKPWNSVNFI
CAHDGFTLADLVTYNNKHNLANGEDNNDGESHNYSWNCGQEGEFASISVKKLRKRQMRNF
FLCLMVSQGVPMIHMGDEYGHTKGGNNNTYCHDNYINYFRWDKKEESASDLFRFFCLMTM
FRRECESLGLNDFPTAERLQWHGHTPGKPDWSDTSRFVAFTLIDSVKGEIYVAFNTSHLP
VTITLPDRPGYRWEPLVDTSKPAPFDFLSNEVPERDLAIKQYAHFLDANLYPMLSYSSIV
LLLSPDENA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggacttaatccgttgcacttcctgcttccagcattctcccacactcatcgctccaaca
ttccgccaccgtaccactccaaaacctaacttgactacaatatccaacaaccatgcaaca
gtatcaacgactagaatggtggttaaagcacgcggaggtggagcggctgaggccgaaact
gctttggttgacaagcctaaggttttaaagagatttcaggtgtctgatggccatcccgct
ccatttggtgccactattcaggacggtggcgtcaattttgcgatatattcggccaatgcc
acttctgctactctctgcctcattgctctctcggatttgcaacagaatagagttacggag
cagataccacttgatccattggctaataagactggagatgtgtggcatgtatttttgaaa
ggaaattttaaagatatgctatatggatacatatttgacggggagttttctcctgaaatt
ggtcattactatgattcttccaggattttattggatccgtatgcaaaggcagttataagc
agaggggagtttggggctttagggcctgaagataattgttggccccaaatggccggaatg
gtgcctacttcagaagatcagtttgattgggaaggtgatttacctttgagacatccaggc
agagatctcataatttacgaaatgcatgtgcgtggatatacaaggcatgaatctagcggg
acaaaatttcccggcacgtattgtggtgtggtggaaaagcttgaccacttaaaggaactt
ggagtcaactgcatagaattaatgccatgtcatgaattcaatgagttggagtactacagc
tacaattctgttttgggtgactataagttgaacttttggggatattcaacaatcaattat
ttttcccccatgataaggtattcatcttctggtattcgtagctgtggtcgtgatgcaatt
aatgaattcaaatatcttgttaaagaagcacataaacgcggaattgaggttatcatggat
gttgttttcaatcacacagctgaaggcaatgagaaaggtctcagtgtgtcatttagaggt
gttgataactgtgtctattacatgctggcacctaagggagagtactacaattattcaggt
tgtggaaacacattcaactgtaatcatcctgtggtgcgtcaatttatattagactgccta
agatattgggtagcagaaatgcatgtcgatgggtttcgctttgatcttgcttccattatg
accaggagtagcagtctttgggattcagtaaatgtatatggagatcctttagaaggtgac
ttgataacaactggtacccctctcagcaatcccccattgattgacatgatgagtaatgat
cctgtacttcatggagtgaagcttatagctgaagcatgggatgcaggtggcctttaccaa
gttggcagatttcctcactggggtgtttggtcagaatggaatgggaagtatcgagacatt
gtacgacagtttatcaagggtacagatgggctttctggggcttttgctgaatgcctttgt
ggaagcccaaacttatatcagaaaggaggagggaaaccatggaacagtgtcaactttata
tgtgcccatgatggttttactttggctgatctagttacctataacaacaaacacaactta
gcaaatggggaagacaacaatgatggagaaagtcataactatagctggaactgtggacag
gagggggagtttgcaagtatttcggtaaagaaactgaggaaacgccaaatgcggaatttc
ttcctctgccttatggtttcccaaggtgtcccaatgattcacatgggtgatgaatatggt
cacacaaaaggggggaacaacaacacatactgccatgataattatatcaactactttcgg
tgggataaaaaggaagagtctgcatctgatctcttcaggttcttctgtcttatgaccatg
ttccgccgtgaatgtgagtcacttggcttaaatgacttcccaacggcagagaggttgcag
tggcatggtcatactcctggaaagccagactggtctgacacaagtcgttttgttgctttc
acattgattgattctgtgaagggagaaatctatgttgctttcaacaccagtcatttaccg
gttacaattacattgccggatcgcccaggatatagatgggagccattggtggatactagt
aagcctgcaccatttgattttctatccaatgaagtcccagaaagagatttggccatcaaa
caatatgctcatttccttgatgccaatctataccctatgctcagttattcttcaattgtt
cttctactttcaccagatgaaaatgcttag
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