Gossypium raimondii: 105779774
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Entry
105779774 CDS
T04129
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
gra
Gossypium raimondii
Pathway
gra00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
105779774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105779774
Enzymes [BR:
gra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
105779774
Membrane trafficking [BR:
gra04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
105779774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
AlgF
Motif
Other DBs
NCBI-GeneID:
105779774
NCBI-ProteinID:
XP_012459151
UniProt:
A0A0D2V3Q5
LinkDB
All DBs
Position
4:complement(36805600..36814373)
Genome browser
AA seq
1025 aa
AA seq
DB search
MGAVELIGVVLFLGVLCAESKYMVYNTSAGIDAGKINVHLVPHTHDDVGWLKTVDQYYVG
SNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWNDQSELTQSIVKKLVNSGQ
LEFINGGMCMHDEAVPHYIDMIDQTTLGHRFLKEEFGVTPRIGWQIDPFGHSAVQAYLLG
AEVGFDSFFFGRIDYQDRIKRKKEKSLEVIWRGSKSLGSSAQIFAGAFPENYEPPPGFYF
EVNADSPVVQDNVNLFDYNVQDRVNDFVAAAIAQANITRTNHIMWTMGTDFRYQYAHTWY
RNMDKLIHYVNKDGRVNALYSTPSIYTDAKYATSKSWPLKIEDYFPYADRANAYWTGYFT
SRPALKFYVRKMSGYYLAARQLEFFKGRNDSGPNTDSLADAMAIAQHHDAVTGTEKQHVA
NDYAKRLSIGYTEAEKVVASSLACLTDSKSSFGCGDPTTNFQQCPLLNITYCPASEADLS
HGKNLIVVVYNSLGWKREDVIRFPVVNEDVTVHDSEGRKIESQLVPIVDAYVDLRKYYAR
AYLGSSPGDVPKYWIAFTVSVPPLGFSTYTISASKKPGAGSTKSSIYKFQEGEKPAIEVG
EGNLKLTLSAPSGKIINYVNNRNLVEESVEQSFSYYTGYNGVNDKAPQNSGAYVFRPNGT
YHIKAEQASLTVIQGPLINEVHQQINPWIFQTTRLYKEKEHVEVEFIVGPVPIDDEFGKE
VATQITTSLENSKTFYTDSNGRDFIKRIRDFRTDWDLEVNQPVAGNYYPINLGIYIRDSK
KEFSVLVDRSLGGSSIVDGQIELMLHRRLLLDDSRGVDEALNETVCVLDDCRGLAVQGKY
YYRIDPLGEGAKWRRSFGQEIYSPLLLAFAEEDGENWMSSHTPTFSAIDASYSLPDNVAL
ITLQELDDGKVLLRLAHLYEVGEDSDLSVMSKVELKKLFPGKKIAKVRELSLSANQEREE
MEKRRLVWKVEGESENQNENPKVVRGAPVDPKKLEVELAPMEIRTFVMEFEVDLMSTTFK
RIVDA
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttgagttgatcggcgtggtgctatttttgggggttttatgtgctgaatcg
aaatacatggtttataacacttcagctggaatagatgctgggaaaatcaatgttcatttg
gttcctcacacccatgatgatgttggttggttaaaaaccgttgatcagtattatgttggc
tctaacaattccatccagggagcttgtgtgcagaatgtgttggattctttggtgccggca
ctgttagctgacaaaaatcgcaagttcatttatgttgagcaggcattttttcagcgatgg
tggaatgatcagagtgagctaactcagagtatagtcaagaaacttgtcaactcgggtcaa
ctggagttcataaacggaggcatgtgcatgcatgatgaggcagtaccacattacatagac
atgattgatcaaacaactcttggacatcgattcctaaaagaggagtttggtgtcactcca
agaattggatggcaaattgatccttttggacattctgcagtacaggcttacttattgggt
gcggaggtgggattcgactcatttttctttggccgcatagactaccaagacaggattaag
cgaaaaaaagagaagagtctcgaagttatttggcgcggttctaagagcctgggctcatct
gctcagatttttgcaggagcattcccagaaaattatgaacctccaccaggtttctacttt
gaagttaatgctgattcccctgttgttcaagataatgtcaatttgtttgattacaatgtc
caagacagagtgaatgactttgttgccgctgcaatagcacaggcaaacataactagaaca
aatcacataatgtggaccatgggaacagattttaggtatcagtatgcacacacttggtac
cggaacatggacaagcttattcattatgtgaataaggatggacgtgtcaatgctctctac
tctactccatccatatatactgatgctaaatatgctacaagtaaatcttggcctctcaaa
attgaggactactttccatacgcagatcgtgcaaatgcttactggacaggatactttaca
agtagaccagctttaaaattctatgttagaaaaatgagtggctactatctggcagcaagg
caacttgaatttttcaaagggaggaatgattcagggccaaatacggactcactggcagat
gctatggctattgctcaacatcatgatgctgttacaggcactgagaagcagcatgtggcc
aatgattatgcaaaaaggctatcaataggctacacagaggctgagaaggttgttgcatct
tcacttgcttgcttaactgattcgaagtcatcctttggatgtggtgacccaaccaccaat
ttccagcagtgtccacttctgaatataacttactgtcctgcatcagaagctgacctgtct
catggaaagaacttgattgttgtggtctacaattctttgggatggaaaagagaggatgtc
atacgttttcctgttgttaatgaagatgttactgttcatgattctgagggaagaaaaatt
gaatcacagcttgttccaatagttgatgcctatgtggacctaaggaagtattatgctagg
gcatatttaggtagcagcccaggtgatgtacctaagtattggattgcatttacggtatct
gttccacctcttggcttcagcacttacaccatctctgcctctaaaaagccaggagctgga
tcaaccaaatcgtctatatacaaatttcaggagggtgagaaaccagctattgaagttggt
gaaggaaatttaaagcttactctttcagctccttcagggaagatcataaattatgtcaac
aacagaaacttggttgaggaatcagtggaacaatcatttagctattacactggatataat
ggagttaacgacaaagcaccccagaactctggggcatatgtcttccgtccaaatggcaca
taccacataaaagctgaacaggcctcattgactgttattcaaggaccattgataaatgag
gtgcatcagcagatcaatccgtggatatttcagactactagactttacaaagagaaggag
catgttgaagttgagttcattgttgggcctgtgccaattgatgatgaatttggaaaagaa
gtagcaactcagataactacttctctggaaaacagcaaaacattctacactgattctaat
ggacgtgattttattaaacggattcgtgattttaggacagactgggacctggaagtaaac
caaccagtcgctggaaattattacccaattaatttaggaatttacattcgtgatagtaag
aaagaattctcggtcctggtagatcgatctctaggaggatctagcatagtggatggacaa
atagagttgatgctccacaggaggctgctccttgatgactctagaggtgttgatgaggct
ctaaatgaaacagtctgcgttcttgatgattgcagaggactagctgtccaaggaaaatat
tattacagaattgacccacttggagagggtgctaagtggcgtcgttcttttggccaagag
atatactcacccctcctcttagcatttgcagaagaggatggagagaactggatgagttct
cacacacccacattttctgcaattgatgcctcctatagtttacctgataatgttgcactt
ataactcttcaggagcttgatgatggaaaagtcctccttaggttggcacatttatacgag
gttggagaggacagtgatctttctgtaatgagtaaagtggaactgaagaagctgtttcca
ggcaagaagatagcgaaggtgagagagttgagcttatctgcaaatcaagaaagagaagaa
atggagaagaggaggcttgtttggaaagtagaaggagaaagtgaaaatcaaaatgaaaat
cccaaggtggtgagaggtgcaccagttgatccaaaaaaattggaggtggagcttgctccg
atggaaatccgtacctttgtcatggaatttgaagttgacctgatgtctactactttcaag
agaatagttgatgcataa
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integrated database retrieval system
