Gossypium raimondii: 105779807
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Entry
105779807 CDS
T04129
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gra
Gossypium raimondii
Pathway
gra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105779807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105779807
Ion channels [BR:
gra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105779807
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
105779807
NCBI-ProteinID:
XP_012459192
UniProt:
A0A0D2UZZ9
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Position
4:50255890..50262689
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AA seq
712 aa
AA seq
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MNYPPEKVVRFQDWNSEKTCEGHYANNNGINSGKFTFAINSFSEKFQRGVESGSERIKAI
RKSFKSSSFNHVVAKGFGSSKKVLDPQGPFLQRWNKIFVLSCIIAVSIDPLFFYVPVVND
DKKCLALDEKMETTACVLRSFTDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVEDSQAIAK
RYLRSYFLIDVLAVLPLPQLVILIIIPEMSGLKSLNTKNLLKIVVLFQYLPRVFRIYPLY
KEVTRTSGILTETAWAGAAFNLFLYMLASHVFGASWYLFSVEREFTCWKGACGNNTTCHR
SFYCDNGDSYFRTLLNQSCPIQTPNTTLFNFGIFLDALQSGIVESKDFPEKFFYCFWWGL
QNLSSLGQNLETSTYVFEICFAVFISISGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRD
AEQWMSHRLLPENLRERIRRYEQYRWQETRGVDEENLLRNLPKDLRRDIKRHLCLALLMR
VPMFEKMDEQLLDAMCDRLKPVLYTEESYIVREGDPVDEMLFIMRGKLLTVTTNGGRTGF
FNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALTEVEAFALMADDLKFVASQFR
RLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYSKKKLEESLREEENRLQDALANAGGSS
PSLGATIYASRFAANALRALRRNRSRKARVTERVPPLLLQKPAEPDFTAEEQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaattatccaccagagaaggttgtgaggttccaggactggaattcagagaaaacctgc
gaaggacattatgctaataataatgggataaattcagggaaatttacatttgcaataaat
tcattttcagaaaagtttcaaagaggggttgaatctggttctgagaggattaaagcgatt
agaaagtcatttaaatctagttcattcaaccatgttgttgctaaaggctttggttctagt
aagaaagttcttgatccacaggggccattccttcaacgctggaacaagatatttgtatta
tcatgtataatagcagtctcaattgatccactgttcttttacgttccagtggttaatgat
gacaagaagtgccttgccttggatgaaaaaatggagaccactgcttgtgtgctgcgttca
ttcactgatatcttctatataatccatattatttttcagtttcgtactggattcattgca
ccttcttctcgtgtatttggaagaggtgttttagttgaagattcacaggcaatagcaaag
aggtatctacggtcatactttttaattgatgttctagcagttcttcccctgccacagctg
gtgattttaattatcatacctgaaatgagcggtttgaaatcattgaatacgaagaacttg
ttgaaaattgttgttctcttccaatatcttccaagagtttttcgaatttatccactgtac
aaggaagttacaaggacctctggcatactaactgaaactgcatgggctggtgctgcattc
aatctgtttctttacatgctagcaagccatgtttttggggcttcttggtacttgttttcc
gttgaaagggaattcacatgctggaaaggcgcctgtgggaataatactacatgccaccgc
tcattttactgtgacaatggtgattcttattttaggacattgctaaatcagtcatgcccc
atacaaacacccaacacgacgcttttcaattttggaatattccttgatgcccttcaatct
ggtattgtggagtcaaaagattttccagagaaatttttttactgtttctggtggggcctg
caaaacctaagttctctgggtcagaaccttgaaactagtacctatgtattcgaaatctgc
tttgcagttttcatttcgatctcaggcttggttctgttttcatttctcattggaaatatg
cagacatatttgcagtccacaactaccagattggaggagatgagagtgaaaagacgtgat
gcagaacaatggatgtcccaccgcttactacctgagaatctgagggagcggattagacga
tacgagcaatacaggtggcaagaaactagaggagttgatgaagagaatttacttcgtaat
ctccccaaggacttaagaagggacataaagcgccatctttgcttggctctgctcatgaga
gtgccaatgtttgagaaaatggatgagcaattactggatgcaatgtgtgaccgtctcaag
ccagttctctacacagaggagagctacattgttcgggagggagacccagttgatgagatg
ctcttcatcatgcggggcaaactattgacagtgacaacaaatggtggaagaactggcttc
tttaattctgaatatctgggggcaggagacttctgtggagaggaacttctcacatgggct
ctagatcctcattcttcatcgaacctccctatctcaacaagaactgtccgggcccttaca
gaagttgaagcttttgctctgatggctgatgacttaaagtttgttgcttctcagttccgt
cggcttcatagtaagcagctgcgccacactttcaggttctattcacagcagtggcgaact
tgggctgcttgttttatacaagctgcttggcgccgttatagcaaaaagaaactagaggaa
tctttgagagaagaggagaatagattgcaagatgctttagccaatgctggtgggagctcg
ccaagtctgggtgccactatttacgcctcacggtttgctgccaatgcgcttcgtgcttta
cggcgaaaccgttctcgtaaggcaagagtaacagagagggtaccgcctctgctgcttcag
aagccagcagagcctgactttactgctgaagaacagtaa
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