Gossypium raimondii: 105779816
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Entry
105779816 CDS
T04129
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
gra
Gossypium raimondii
Pathway
gra03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105779816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105779816
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105779816
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
105779816
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
105779816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Cas_Cas4
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
105779816
NCBI-ProteinID:
XP_012459200
LinkDB
All DBs
Position
4:complement(37052079..37062706)
Genome browser
AA seq
1352 aa
AA seq
DB search
MPPKTRRKLNPSSSKKSNVPNNQSQVQPSKFGIQHFFERHSQNALLASQKLNHLSSPPAP
PSATPPTNPIPLSSPKSNAASNGVVSVSPNPNLHPSSSPAMEAADEVSPMVSKSTSLKRF
NFSPGMLIKQSQDDGGDEVTWKISPVNERLLAVSKHTPVLPDSSKHNSFSIHQCSQTKGI
NTAAKVDKWLSSPSPKGKADKKPLLQANRIGLKRLNPFQDKEVGDSIADENTCLSSRQTP
FCTPPSLPYCPDKLANGVASHPLGLKQHKKALLELLDQVEDVISVEDFVSSESEPYSSKA
QEGQSKEIPVTVDSIGNDVLMGTTNKVSGTSSNGYFLVLEVSEKQTFPESGGSQCPYKVL
RLVNEKSGEERAVYLWEEWSYSVIAPGDTVNVIGEFDEEGKCNVDHENNFLIVHPYILVS
GTRVAGSFSCPRRTVLDERLRCNEHSTAALIGILLHQIFQAGLMKESPTVHFLEEYARIV
LQKNMESLYACGVNENEIYKTLTEAIPKLVNWIALFKDTQQEPQVPTVDFGSDNGAKKVK
VLEVIDIEELAWAPKYGLKGMIDVSVRVKVDSGGKEGDEKIMPLEFKTGRMANGQASAEH
CAQVILYSLLMSERYLKHIDSGLLYYLQSDQTQGIVVRRSDLVGLIMRRNELAHDILKAL
TTQQLPPMLQIPSMCKGCRHLDVCTLYHKAFGGNTESSGLGDIFDSHVHHFSNAHGVFLR
HWDQLIDLEAKEMQLAKKEIWRSHNLKNENSTGCLSSLVLDELPQQGSHKENRFIYHFVC
RYSPTNNLSGSDRNSIRAASSLTKDLDCSLKSGDYVILSTESGRQFVATGIIVELSPDRV
SVSFSKGLRLPGGNLSSMREKLLQEVWRIDKDEIMTSFSVMRFNLIQMFLDNEQSSHLRK
MIVDLAAPRFDSGCIFSQDPAISYIWSEKSLNDDQRRAILKILTAKDYALILGMPGTGKT
STMVHAVKALLMRGASILLTSYTNSAVDNLLIKLKSQGIDFVRIGRHESVHEEIKGHCFS
GMNINSVEEIKLKFDQVKVVAVTCLGITSPLLSGKKFDVCIIDEAGQTTLPVSLGPLMFS
STFVLVGDHYQLPPLIQSTEAREKGMGISLFCRLSEAHSHAIAPLQSQYRMCQSIMELSN
ALIYGDRLRCGSPEIANAKLKFTKPIACSSWLKIVLNPSKPVIFVNTDMLPALEARDQKT
VNNPMEAYIIAEITDGLVNNGIEGKDIGIITPYNSQASFIRHACKASVETHTIDRYQGRD
KDCILVSFVRSNENPRSCSASLLADWHRINVALTRPKKKLIMVGSWGTLSKVPMLKLLID
KIDEQSGILSLSNDDFNHQTWALQRCSWSQIR
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaaccagaaggaagcttaacccttcttcatcaaagaaatctaatgttccc
aataatcaatctcaagttcaaccgtctaagttcggcatccaacatttcttcgaacgccat
tcccaaaacgctcttctagcttcccagaaactcaatcatctttcttctcctcccgcaccc
ccttccgctacccctcccaccaatcctattcctctatcctctcccaaatcaaatgccgct
tccaacggcgtcgtttctgtatccccaaaccctaacctccatcccagttcctctccggca
atggaggctgctgacgaggtatcacctatggtctccaagtctacctctctgaagcgtttc
aacttttcccctggaatgttgataaagcagagtcaagatgatggaggggatgaggtcaca
tggaagatatctccggtcaacgaacgtcttctagcagtctcaaagcacacccctgtatta
cctgattcctcaaagcacaactctttctcaatacaccaatgctctcagaccaagggcata
aatacggctgctaaggttgacaaatggctctcgtcgccgtcccccaaaggcaaagctgat
aaaaagcctttgcttcaggccaacaggattgggttgaaaagattgaacccttttcaggat
aaagaggtcggtgacagcattgctgatgagaatacttgtttgtcaagtagacagactcca
ttctgcactccaccatctctaccatattgtcctgataagcttgccaatggtgttgcatct
catcccctgggtttgaagcagcacaagaaggcattgcttgaacttctagatcaagtagaa
gatgtaatttctgttgaggattttgtatccagtgaatcagagccatattcatcaaaagcg
caagagggacagtccaaagaaattcctgtaacagttgattctataggaaatgatgtgtta
atgggcacaacaaacaaagtctctgggacatcttctaatggttatttcctagtattggag
gtatctgagaagcaaacttttccagagtctggtggttctcaatgcccgtataaggttctt
cgcttggtaaatgagaaaagtggggaagagcgtgctgtttatttgtgggaagagtggtcc
tacagtgtcattgccccaggagacactgtgaatgtcattggtgaatttgatgaagaggga
aagtgtaatgtggatcatgaaaataattttcttatcgttcatccatatattctggtctct
ggaactcgggtggctggcagttttagttgcccaaggagaactgtcctagatgagagacta
cgatgcaatgagcattcgactgcagctcttattggcatcttgctccaccaaatttttcag
gcaggacttatgaaagagtcccctacagtacactttttggaagaatatgcaagaatagtg
ctccagaagaacatggagagcttatatgcatgtggagtaaatgaaaatgaaatatataaa
accttgactgaagctattccgaaactagtaaattggattgctctcttcaaagatacgcag
caggagccgcaagttcccactgtagattttggatctgataatggggcaaaaaaggttaaa
gttttagaggtaattgatattgaggaactggcatgggccccgaagtatggtctgaaagga
atgattgatgtttcagtcagagtaaaggttgactcaggtggaaaagaaggtgatgagaag
atcatgcctctagagtttaaaactggaagaatggctaatggccaggcatccgctgaacac
tgtgcccaagtgatcttgtactctcttcttatgtctgagaggtacctaaaacatattgat
tctggtcttctatactatctccagtcagatcagacgcaagggattgtagttcgaaggtct
gacttggttgggttaatcatgcgtcgtaatgagcttgcacatgatattcttaaggcatta
acaacacaacaactgccccccatgttacagattccaagcatgtgcaaaggctgtaggcat
cttgacgtttgcaccctttatcataaggcatttggtgggaatacagagagtagcggatta
ggtgatatatttgattcacatgtacatcatttttcaaatgctcatggtgttttcctcaga
cattgggatcagttgattgacctagaagctaaagagatgcagcttgcaaagaaagaaatc
tggcgttctcataatctcaagaatgagaactctactggttgcctttcttctcttgttctt
gatgagcttccacaacagggatctcacaaagaaaatagattcatctatcattttgtctgt
cgatattcgcctactaacaatttaagcggatctgatagaaattctattcgtgctgcttct
tctctgaccaaagatttggattgcagtcttaaaagtggagattatgtgatacttagcact
gaatctggccgtcaatttgttgccactgggatcattgtggagctcagccctgaccgtgtt
tccgtttctttttctaagggcttaaggcttccagggggtaacttgtcttcaatgcgagaa
aaactactccaggaggtctggcggatcgacaaggatgaaatcatgacctccttttcagtt
atgcggttcaacctcattcaaatgtttctagacaatgagcaaagttctcatctcaggaag
atgattgttgaccttgcggctcctagatttgacagtggatgcatattcagccaagaccca
gcaatatcttatatctggtccgagaagagcttaaatgatgatcagcgtagagctattctc
aagatacttacagcaaaggattatgctctaattctaggaatgcctggaacaggcaagaca
tctacaatggtacatgctgtaaaagccttgttgatgagaggtgcatccattttgctgaca
tcctacacaaactctgcagttgataatttactcatcaaattaaaatctcagggcattgat
ttcgtgcgcataggaagacacgaatctgtgcatgaggaaattaaggggcattgtttttca
gggatgaacattaatagtgttgaagaaattaaactgaaatttgaccaagtcaaagttgtt
gctgtcacttgcttgggcatcactagtccattactctctggaaagaaatttgatgtatgc
attatcgatgaagctggacagacaaccctcccagtgtcactaggacccttgatgttttca
tctacatttgtccttgttggagatcactatcaactgcctcccttgattcagagtacagag
gctcgagaaaaaggaatgggaataagtttgttctgtaggctatcagaagcacattcacat
gcaattgcaccattgcaaagccagtaccgaatgtgtcaaagtattatggaactgtcaaat
gccttgatatacggtgatcgattgcgttgtggttctcctgaaatagctaatgcaaaactc
aagttcacaaaaccaatcgcttgttcatcatggctaaaaattgttctaaatccaagcaag
ccagtcatttttgttaatacagatatgttgcctgctttagaggctagagaccagaaaact
gtgaataatccaatggaagcttatataattgcagagataacagatggattagtcaacaat
ggaattgaaggcaaagatattggcatcattacaccttataactcacaggcaagtttcatc
agacatgcttgcaaagcatccgtggagacgcatactattgacagataccaggggagagac
aaggactgcatattagtatcctttgttaggtccaatgagaatcctagaagctgcagtgct
tcactgcttgcagattggcataggattaatgttgctcttacacgacccaagaagaagttg
ataatggtggggtcatggggaaccctgtcaaaggttccaatgcttaagcttcttattgac
aaaattgatgagcaatctggtattttgagtttgtccaacgatgatttcaaccaccaaact
tgggcgcttcagagatgctcttggtcgcagatcagatag
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