Gossypium raimondii: 105779841
Help
Entry
105779841 CDS
T04129
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gra
Gossypium raimondii
Pathway
gra03020
RNA polymerase
gra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105779841
09124 Replication and repair
03420 Nucleotide excision repair
105779841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105779841
03400 DNA repair and recombination proteins [BR:
gra03400
]
105779841
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105779841
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105779841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
105779841
NCBI-ProteinID:
XP_012459245
UniProt:
A0A0D2V5K4
LinkDB
All DBs
Position
4:complement(3092423..3095004)
Genome browser
AA seq
318 aa
AA seq
DB search
MEGASYQRFPRVKIRELKDDYAKFELHDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSQRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCISDQTLDV
TSKDLYSSDHTVVPVDFTDSAGYESSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPEIHINEDMMDTLTLEEKQSFVDSSPTRVFDIDPNTQQVVVVDPEAYTYD
DEVLKKAEAMGKPGLVEIYAKEDSFIFTIESTGAVKAFQLVLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagcttcgtaccagcgattcccaagggtcaaaatccgggaactcaaagatgac
tacgctaaattcgagctccacgacaccgatgcttccatggccaacgccctccgccgcgtc
atgatcgccgaggttcccaccatagctatcgatctcgtcgaaatcgaagttaactcttcc
gtcctcaacgacgagttcatcgcccatcgactcggtctcatccctctcactagccaacgc
gccatgtcgatgcgattctcgcgtgactgtgacgcctgcgacggtgacggacagtgcgag
ttctgctccgtcgagttccatcttcgcgccaaatgcataagcgatcaaacactggatgtc
accagtaaggatctttacagttccgatcatacggttgttcccgtcgatttcaccgattcc
gctggctacgaatcctctgaacaaagggggattatcatcgtgaaattgcggcgagggcag
gagttgaggctgagggcaattgcgaggaaagggataggaaaagatcatgcgaaatggtca
cctgccgcgactgtgactttcatgtatgaacctgagattcacatcaatgaagatatgatg
gataccttgacccttgaggagaagcaaagctttgtcgacagtagtcctactagagtcttt
gacattgatcctaatacccaacaggttgtggtggttgatccagaagcatatacctatgac
gatgaagtattaaagaaagctgaagctatgggcaagccggggctcgtggagatatatgcc
aaagaagacagtttcattttcactatcgaatctaccggtgcggtcaaagctttccagtta
gtccttaatgctatcgaaatccttaaacagaagctggatgcagttcgcctgtctgaggat
actgtggaagctgatgatcagtttggtgaactaggtgctcacatgcgaggaggttga
DBGET
integrated database retrieval system
