Gossypium raimondii: 105779960
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Entry
105779960 CDS
T04129
Name
(RefSeq) chloride channel protein CLC-b
KO
K05016
chloride channel 7
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105779960
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105779960
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105779960
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105779960
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
105779960
Ion channels [BR:
gra04040
]
Chloride channels
Chloride channel (CLC)
105779960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
105779960
NCBI-ProteinID:
XP_012459445
UniProt:
A0A0D2S000
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All DBs
Position
4:complement(35540079..35543716)
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AA seq
785 aa
AA seq
DB search
MEEDSNHLANPETPHSLEAETYEEEEGRDPESNSLRQPLLKRNRTLSSTPLALVGAKVSH
IESLDYEINENDLFKHDWRRRSKVQVLQYIFLKWSLAFLVGLLTGLIATLINLAIENIAG
YKLLAIVGFIEEGRYISGLIFFTGINFFLTLIAAVLCVCFAPTAAGPGIPEIKAYLNGVD
TPNMFGATTLLVKIVGSIGAVSAGLDLGKEGPLVHIGSCIASLLAQGGPDNYRIKWRWLR
YFNNDRDRRDIITCGSSSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVV
LRAFIEICNSGKCGLFGTGGLIMFDVSDVKVSYQAMDVIPIIIIGIIGGLLGSLYNHVLH
KVLRVYNLINHKGKMHKLLLALGVSLFTSVCQYCLPFLAQCRACDPSFPETCPTNDRSGN
FKQFNCPDGYYNDLATLLLTTNDDAVRNIFSTNTTNEFHVTSILIFFALYCILGLITFGI
AVPSGLFLPIILMGSGYGRLLSMAMGSYTNLDEGLFAVLGAGSLMAGSMRMTVSLCVIFL
ELTNNLLLLPITMIVLLIAKTVGDCFNPSIYEIILELKGLPFLDANPEPWMRNLTVGELA
DVKPPVVTLCGVEKVSRIVDVLRNTTHNAFPIVDQGVPVPGMVATGATELHGLILRAHLV
QALKKKWFLPEKRRTEEWEVREKFNWVELAEREIKIEQVAVTRDEMEMYVDLHPLTNTTP
FTVVESLSVAKALVLFRQVGLRHLLIVPKYQGAGVAPVVGILTRQDLRAYNILSAFPHLE
RPKLS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggattcaaaccatttggcaaatccagaaacaccccatagcttggaggctgaa
acttatgaagaagaagaaggaagagatcctgagagcaattctttgcgtcagccacttctc
aaaagaaacagaaccctttcttccactccactagccttggttggagccaaggtctcccat
attgagagtttggattatgagataaatgaaaatgatcttttcaagcatgattggagaaga
agatctaaagttcaagttttgcagtacattttcttgaaatggtctttggctttccttgtt
ggattgttgacaggattgattgccacccttatcaatcttgcaattgagaatattgctggc
tataagcttcttgctattgttggtttcatagaggagggcaggtatatatctgggttgatc
tttttcactgggataaacttttttctgaccttgattgctgcagttctctgtgtgtgtttt
gccccaactgcagctggtcctggtatccctgaaatcaaggcttatctcaatggagttgat
actcctaacatgtttggtgctacaacattgcttgtcaagattgttggcagcattggagca
gtttctgctggtctagatctggggaaagaagggcctttagtgcacattgggagttgcatc
gcttcattactagcccagggagggcctgataactaccgcatcaagtggcgttggcttcgc
tacttcaacaatgatcgcgatcgcagagatattatcacctgtggttcttcctcgggtgtt
tgtgcagctttccgtgctcctgtgggaggtgtcctatttgctctcgaagaagttgcaaca
tggtggaggagtgcccttctctggagaactttctttagtacagcagtggtggtggtagtg
ctaagggcattcatcgaaatctgcaactctgggaaatgtggcctttttggaacaggaggg
ttgatcatgttcgatgttagcgatgttaaagtcagctaccaagccatggatgtaatccca
attatcataattggaatcattggtggacttttgggaagcttatataatcatgttcttcat
aaggtcctcagagtctacaatctcattaaccataaggggaaaatgcataagctactccta
gctcttggtgtctctctttttacctcagtgtgccaatactgtctcccatttctagcccaa
tgcagagcatgcgatccatcttttcctgagacttgtccaacaaatgatcggtctgggaac
ttcaagcagttcaactgccctgatggctactataatgatctagccaccctcctccttacc
actaatgatgatgctgttcgaaacattttctcaaccaacactacaaatgaattccatgtt
acctccattttaatcttttttgcactttattgcatcttaggactcattacttttggcatt
gctgttccttctggtctcttcctccctatcattctgatgggctcaggttatggtcgactt
ctcagtatggccatgggatcatatacaaacttagacgagggtctttttgctgttcttggt
gcaggctcccttatggctggctcaatgaggatgactgtgtcactttgtgtcatattcctt
gaactcacaaacaaccttcttttgctgccaataactatgatagtccttttgattgccaaa
actgttggagactgcttcaaccccagtatctatgagattatactggaacttaaaggcctt
cctttcctggatgcaaatcctgaaccctggatgagaaatctcacagttggcgagcttgct
gatgtcaagccaccggtagtcactctttgtggggtggaaaaggtttcacggatcgtggac
gtattgaggaacactacacataatgcattccccatcgtagaccagggtgtgccggtgcca
ggcatggtagccaccggtgcaaccgaactgcatggactgatcctcagagctcaccttgtt
caagccttgaagaaaaaatggttcctgccagagaaaagaagaactgaggaatgggaagtg
agggagaaattcaactgggttgaacttgctgaaagggaaatcaagattgagcaggtggca
gtgacccgtgatgaaatggaaatgtatgttgatttacatcctctcaccaacacaacccct
ttcactgtggtggaaagcttgtcagtggctaaagccttggtgctgttcaggcaagtcgga
ctccggcatttgctcatcgtgccaaagtatcaaggtgcaggggtagctcctgtagttggg
atcttgaccaggcaagacttgcgggcttacaacattttgagtgcctttcctcatctagaa
agacccaagctttcttaa
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