KEGG   Gossypium raimondii: 105780006
Entry
105780006         CDS       T04129                                 
Name
(RefSeq) pre-mRNA-processing protein 40A
  KO
K12821  pre-mRNA-processing factor 40
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105780006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gra03041]
    105780006
Spliceosome [BR:gra03041]
 Complex A
  U1 snRNP components
   U1 related factors
    105780006
 Complex B
    105780006
SSDB
Motif
Pfam: FF WW WW_TCERG1 FF_RHG35_4th WW_2
Other DBs
NCBI-GeneID: 105780006
NCBI-ProteinID: XP_012459513
UniProt: A0A0D2S3C8
LinkDB
Position
4:complement(3300840..3314382)
AA seq 994 aa
MDPSQNFPPPMSGQFRPVVPSQQPQQFVSVPPQQFQPVGRGVTVMNAGFPSQTPQPQIPQ
VMQQLPARPGQPGHILPPPPSVSLPAAQPNLHVNPGASVPQPNIQAPNNYFPGVPASHLS
SSYTFAPSSYGQVTVSHNAMAQYQPMAQLQAPNVPVGGQVGIHVSQSTSVTSAQQIGEQP
SASTATIPPKPTEEALTDWIEHTSANGRRYYYNKKTRQSSWEKPLELMTPIERADASTNW
KEYTSPDGRKYYYNKVTNLSTWSLPEELKLAREQVEMASAKGPLSDVSSHIPAPVPPASK
AQSGADTPSTIIQGASSSPVPVAPVPSSSKIESVVVSGSDLPVATSSTVTNVDVVQIVED
TITPSVAVSESSEVSLSVADAATTLMNNISKVSSLDMVSSEGVSTQNADETVKDVVVSEK
INNALEEKAIDQESLTYASKQEAKDAFKALLESANVGSDWTWDQAMRVIINDKRYGALRT
LGERKQAFNEFLGQKKKQDAEERRIKQKKAREEYKKMLEECLELTSSTRWSKAVTMFEND
ERYKAVEREKDRKDFFENYIDELRQKERVKAQEQRKQNVMEYRRFLESCDFIKANSQWRK
VQDRLETDERCSRLDKIDRLEIFQEYIRDLEKEEEEQRRIQKEELRKTERKNRDEFRKLV
EGHVAAGTLTAKTHWRDYCMMVKDSPPFLAVASNTSGPTPKDLFEDVAEELQKQYDDDKA
RVKDAVKLRKICLASTWTLEDLKAAILEDISSPPISDVNLKLIFEELLERVKEKEEKEAK
KRKRLADDFFDLLHSMKEITSSSAWEDCKHLLESSQEFSSIGDEDICKGIFDEYVKQLKG
DAKEKERRRKEDKAKKEKERDERERRKEKHGRDKERGYEREKEEHLREEPSEAHGDISEV
HDENENKRSGKEDSKKHRKRHQSSVDNSNETEKDRTKTHRHSSDRRKSKKHASTPESDNE
SRHKRHKRDHRNGSRRNLDPEELEDGEFGERESQ
NT seq 2985 nt   +upstreamnt  +downstreamnt
atggacccttctcaaaattttcccccacctatgtctggtcagttccgacctgttgttcca
tctcagcagccacaacaatttgtttcagtgcctcctcagcagtttcaacccgttggcaga
ggagttactgtgatgaatgctggatttccttctcagaccccacaaccccaaattcctcaa
gtaatgcagcaattacctgctagaccaggccagccaggccatattctacctccaccaccc
tcagtttcattgccagctgctcagcctaatctacatgttaatccaggggcatcggtgcct
caacctaatattcaagcgccaaacaactattttcctggggtcccagcatcacacctctct
tcatcatatacctttgcaccgtcttcttatggccaggtaacggtgtctcataatgccatg
gctcaatatcaacccatggcacaattgcaggcacctaatgttcctgttggaggccaggtg
ggtatccatgtgagtcagagtacttctgtcacatccgcacagcaaattggtgaacaacct
tctgcttccacagctactattccgccgaagcccactgaagaggctttaacagactggatt
gaacacacttctgcaaatggacgaaggtattattacaataagaagacacggcaatctagt
tgggagaagccattggaattgatgacaccgattgagagggcggatgcatcgactaactgg
aaagaatatactagtcctgatggaagaaagtattactacaacaaggttaccaatctatca
acatggtcactccctgaagagctgaagttggctcgtgaacaagtagaaatggcgtctgcc
aaaggaccactgtcagatgtttcttctcatattccagctcctgtacctcctgcaagtaaa
gcacaatctggtgctgatacaccgtctacaataattcaaggagcttcctcaagtccggtt
ccagtggcaccagttccttctagtagtaaaattgaatctgtggtggtttctgggtcagat
ttacctgttgcaacttcttcaacagtgaccaatgtagatgtggttcagatagttgaggat
actatcacaccatctgttgctgtttcagaaagttctgaagtttctctctcagtggctgat
gctgctacgacactgatgaataatatcagcaaagtttcttctttggatatggttagttct
gaaggagtttcaacacaaaatgcagatgaaactgtaaaagatgtggtagtgagtgagaaa
attaacaatgcattggaagagaaagcaattgatcaagaatctttgacttatgccagcaag
caagaggctaaagatgcattcaaagctcttttggagtctgcaaatgttggttctgactgg
acatgggatcaggccatgagagtaataataaacgacaaaagatatggtgctttgagaaca
cttggggagagaaagcaagcttttaatgagtttttgggtcaaaagaaaaaacaggatgct
gaggaaaggcggattaaacagaaaaaagcccgggaagaatataaaaaaatgttagaagag
tgcttggagttgacgtcatccacaagatggagcaaagcagttactatgttcgaaaatgat
gagaggtataaagctgttgaacgggagaaggataggaaggatttttttgagaattacatc
gatgaactcaggcaaaaggaacgggtgaaggcacaggagcagcgtaagcagaatgttatg
gagtacagaagatttttggaatcttgtgacttcattaaggcaaatagccagtggcgaaaa
gttcaggaccgcttagagactgacgaaagatgttcacgtcttgacaaaattgaccgcttg
gaaatatttcaggaatatatacgtgacttagagaaggaagaagaggagcagaggaggata
caaaaggaagaactgaggaagacagagcgtaaaaatcgtgatgagttccgcaagttggtg
gaaggacatgttgctgcaggaacacttaccgccaaaacccattggcgtgattattgcatg
atggttaaagattcgcctcccttcctagcagttgcatccaacacctcaggtccaactcca
aaagatttgtttgaagatgtagctgaggagcttcagaaacagtacgatgatgataaagct
cgagtaaaggatgcagtgaagttgagaaagatttgtttggcatcaacttggactctagaa
gacttgaaggctgccattttggaggatattagctctccacctatatcggatgttaacttg
aagctgatttttgaggaattacttgaaagggtcaaggagaaggaggagaaagaagctaag
aagcgtaaacgtcttgctgatgacttctttgatttattgcattctatgaaggagattaca
tcatcttcagcatgggaggattgcaaacatcttcttgaaagtagtcaggaattcagttcc
attggggatgaagacatctgcaaggggatatttgatgaatacgtaaaacagttgaaagga
gatgcaaaagagaaggaacgaagacggaaagaagacaaggcaaagaaggaaaaggagaga
gatgagagggagaggaggaaggagaagcatggaagggacaaagagagaggatacgagaga
gaaaaggaggaacacttgagggaggaaccttcagaagcacatggtgatataagtgaagtt
catgatgaaaatgaaaataaacggtcaggaaaagaagacagcaagaaacatcgtaaacga
catcaaagttcagtggacaattcaaacgaaactgaaaaagatcggactaagacccacagg
catagcagtgatcgcagaaaatcaaaaaagcacgcatcgacacctgaatctgataacgaa
agcaggcataagagacacaagcgagaccatcggaacggttcacgtagaaatcttgacccc
gaggaacttgaagacggagaatttggtgaaagggaaagtcagtag

DBGET integrated database retrieval system