Gossypium raimondii: 105780007
Help
Entry
105780007 CDS
T04129
Name
(RefSeq) organic cation/carnitine transporter 4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105780007
Transporters [BR:
gra02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
105780007
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
105780007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
DUF1304
TMEM234
Motif
Other DBs
NCBI-GeneID:
105780007
NCBI-ProteinID:
XP_012459519
UniProt:
A0A0D2R2H1
LinkDB
All DBs
Position
1:complement(7986724..7990646)
Genome browser
AA seq
535 aa
AA seq
DB search
MANSPGSNPISHGSSLGAPLLVPSKEPGWDSGPGSEPQKVCIDDMLQNYCGEFGYWQLKH
FVLTSLAWALEAFHTMVMIFADRDPGWRCVGGLGCDEKESNVCGLEPGSWEWEGGPGSST
VAQWGLVCGQKYKVGLVQALFFGGCMIGAGVFGHLSDSKLGRKGSLTAVCILNAIFGCLT
SLAPDYSTYLLLRFVTGFSTGGVGLCSFVLATEPVGPTKRGVAGMSTFYFFSTGIALLSG
IAYIFPSWRALYVASSIPSILFLVLVVPFISESPRWYLVRGKMNEAMKIMRTIANANGHH
LPDGVSLALDDEANDASNGNQIWKAATVEKEAISGSIVDVIRSPITRIRLFLAVGINFTC
SVVYYGLSLNVVNLETNLYLTVLLNAVAEMPAFTITAVLLDKFGRKPLAIGTQWFSAIFC
FMGSLTGNVGISKVIRMCCGLLGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQM
GAILAPFVVILGGGFPFLVFGVCGLIGGMLASYLPETLNKPLYDTMTGLEEGELA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggctaactcgccaggatcaaatcccattagccatggttcctcattaggagcacccttg
ctcgtcccatcaaaagaacccggatgggattccgggcctggatccgaaccccagaaggtt
tgcatagacgacatgttgcaaaactactgcggagaatttgggtactggcagctgaaacac
tttgttttaacgagcctggcatgggccctggaagctttccatactatggtcatgatattt
gcagacagggatcctgggtggcggtgtgttggagggttagggtgtgatgagaaggagagc
aatgtttgtgggttggaaccagggtcctgggaatgggagggtggtccggggagctccacg
gtggctcagtggggattggtttgtggacagaagtataaggttgggcttgtgcaagccttg
ttttttggcggctgcatgattggtgcaggggtttttggtcatttatcagattcaaaactg
ggaaggaaaggttccttaaccgcggtctgcatcttaaatgccatatttggttgccttaca
tcattagcccctgactactctacctatctcctactccgcttcgtaacgggattcagcacc
ggaggtgtcggcctctgttccttcgtcctggccactgaacctgttggtccaacgaaacgt
ggtgttgctggaatgtcgacgttctatttcttttcgactggaatcgcattgctctcgggc
atagcgtacatttttccttcatggcgtgcgctgtatgttgcctcgtctatcccctctatc
cttttccttgtcctggtggtccctttcatctctgaatccccacgttggtatcttgttcgt
gggaaaatgaacgaagccatgaaaataatgcgcaccatagctaatgccaacggacatcac
cttcctgatggggtcagccttgcactggatgatgaagctaatgatgcttcaaatggtaat
caaatttggaaagcagcaacagttgaaaaagaagcaatcagtggttccattgtagatgta
atccgatcaccaatcactcgaattcgactattcctagcagtgggaatcaacttcacctgc
tccgtcgtgtactatggtcttagcttaaatgtcgtcaacctcgagacaaacctttacctc
actgtcctacttaacgcggtagctgaaatgccagcattcaccataacagcagttctgttg
gacaaatttggaaggaagccattggcaattgggacacaatggtttagtgcaatcttctgc
ttcatggggagccttacgggcaatgtaggaatatccaaagtaataagaatgtgttgtggg
cttctggggatattcggcatggctgggacttacaatttgttgtttatctacacagcagag
ctcttccctacagtggtgagaaatgcagcacttggatgtgcaactcaagcagcccaaatg
ggagctatattggcaccatttgtggtgattttgggtggtggttttccatttctggtgttt
ggggtatgtggattgattggaggaatgcttgcatcttacttaccagagacattaaacaag
ccattgtatgacacaatgaccggattggaagagggagaacttgcttga
DBGET
integrated database retrieval system
