Gossypium raimondii: 105780041
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Entry
105780041 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105780041
KO
K08518
syntaxin-binding protein 5
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105780041
Membrane trafficking [BR:
gra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105780041
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
105780041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
WDR55
Synaptobrevin
Lgl_C
PEP5_VPS11_N
Beta-prop_IFT140_1st
TFIIIC_delta
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
105780041
NCBI-ProteinID:
XP_012459579
UniProt:
A0A0D2S1F8
LinkDB
All DBs
Position
4:8878741..8886449
Genome browser
AA seq
1096 aa
AA seq
DB search
MFAKRLLQKTVHHSQQNVQRGDLKSEDLDLRVAIHYGIPSTASILAFDPIQRLLAIGTLD
GRIKVIGGDGIEGLLISPKQLPYKYLEFIQNQGFLIGISNDNDIQVWNLETRHLACCLQW
ESNITAFCLIGGSHFMYIGDDYGILSVVKYDGEDGKLSHLPYNITANSLSEAAGFSFPDD
QPIVGILPQPHSSGDRVIIAYANGLIILWDVSKSQIPFIGGGKDLQLKDAVDSDVQDDTF
EHHLQEKEISAICWASSDGSILAVGYVDGDILFWNTSITSSKGERNGQNKNVVKLQLSSA
ERKLPVIVLQWSSNNTSRNDYNGKLFIYGGDEIGSEEVLTVLSLEWSSGMETVRCIGRVD
LTLTGSFADMTLLPTAGATGGNHKADLFVLTNPGQLHLYDGTNLSTLLSEKERKQFAHPV
EFPMFIPTADPSMTVGKFSALPAGGISSKCLSELASITKLCSTPTPAAGIKWPLTGGVPT
QLAVSKDNSIDKLYIAGYQDGSVRIWDASYPILTLLFVLEGEVQGTNMARSSVPVTTLNF
CWHTLNLAVGNECGVVSIYYLGRSDKTSFHYVTETRCEVQSFTQGKGPQCKAVFSLLKSP
VQALHFGNCGAKLTVGFEFGRVAMLDVSSPSILFLTDCVSSSSSPIISLSWLEFKNVHSH
VKSPEHSETDVAIKPEEEIIFILTKDAKIISINGANGEMIHPHPWHLKKEETALSMYIIE
NSFPLSILNCEKRSEESNKDTTAKIEAELDASSTGTEHPSSSEAASSLEHSLDTLLLLCC
ENSLRLYSMKSVIQGKDKTIHKVNHTRPCCWTTTFKKDGRVCGLLLLFQTGDMEIRSLPD
LELVKESSIKSILRWNYKANMDKLMTSDNAQVALTSGCEMAFISLLAGANDFRIPESLPC
LHDRVLAAAADAALSFSSNQKKKQGMAPGILGGIVKGFKGGKVNTSAMPESNFTHLESKF
SKTPFIDTSQNVNKHEEMELDIDDIEIDDTPPVTSSSSHEAVQTKGGKETDREKLLGAAD
DSTPRVRTAQEIIAKYRKAGDASSAAAHARNKLVERREKLERINRRTEELQSGAENFASL
ADELVKAMENRKWWQI
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctaaacgcctgcttcagaaaacggttcatcattcccagcaaaatgtgcagcgt
ggggatttgaaatcagaagatttggatttgcgagttgctatccactatgggatcccatct
actgcatcaattcttgcttttgatcctattcagcgcctcttggctatcgggactttagat
ggacggattaaagttattgggggtgatggaattgagggacttctcatatctccgaagcaa
ttgccttacaaatatttagagttcatacaaaaccagggttttttgattggtatctcaaat
gacaatgatattcaggtctggaatctggagaccaggcatctagcatgctgcttacagtgg
gagtccaacattactgccttctgtctcattggtggctcacatttcatgtacattggagat
gattatggtatactatcagtggttaagtatgatggtgaagatggaaaactttcgcactta
ccctataatataacagcaaattctttaagtgaagcagctggattttcatttcctgatgac
caacctattgttgggattcttcctcaaccccattcttctggagatagggtcataattgca
tatgcaaatggtttgataattctttgggatgtttctaaatctcaaattccctttattgga
ggtggaaaggatcttcaattaaaggatgcagtggattcagatgttcaagatgatacattt
gagcatcatctccaagaaaaggaaataagtgctatttgttgggcatcttctgatggatcc
attctcgcagtgggatacgtagatggggatatcttgttttggaatacaagtattacctct
tctaaaggtgaaagaaatggacaaaacaaaaatgttgttaagctgcaattgtcatccgct
gagaggaaacttcctgtcattgtcttacaatggtcctcaaataatacatcacgcaatgat
tataatggcaaactttttatctatggtggtgatgagataggatctgaagaagttctgacg
gttttgagtcttgaatggtcatctgggatggagactgttagatgtattggtcgtgtggac
cttacattgactggctctttcgctgacatgactttgttgccgactgctggggcaacaggg
ggaaatcacaaagctgatctctttgtgttgacaaaccctggacaactgcatctttatgat
ggtacaaacttgtctaccttgctatctgagaaagagaggaaacaatttgcccatccagta
gaatttcccatgtttatacctacagctgacccatcaatgactgttggaaagttcagcgcc
ctacctgctggtggaatctcatcaaaatgtctttcagagcttgcatcaataacgaaactt
tgctcaacaccaacccctgctgctggcataaagtggcccttgactggcggtgtacccact
caactagctgtctctaaggataacagtattgacaaattgtacatagcaggttaccaggat
ggttcggtccggatctgggatgcttcatatcctatactgactcttctctttgttcttgaa
ggagaagtgcaaggcacaaacatggctcgttctagtgttccagttacaactctgaacttc
tgttggcacactttgaatttggctgttggaaatgaatgcggtgtggtaagcatttattac
cttggcaggtctgataaaacaagctttcactatgtcacggagaccagatgtgaagttcag
agttttacgcaaggaaaaggacctcagtgtaaagctgtattttcccttcttaaatcacca
gttcaagccctgcattttgggaattgtggagccaagcttaccgttggatttgaatttggt
cgtgttgcgatgcttgatgtgagttcaccatcaattttgtttctcaccgactgtgtatct
agttcatcatctccgatcatttcattgtcttggttagagtttaaaaatgttcatagtcat
gtcaaaagccctgagcattcagaaacagatgttgcaatcaaacctgaagaggaaataata
tttatattaaccaaggatgcaaaaataatctctattaacggtgctaatggtgagatgata
caccctcatccatggcacttgaaaaaagaagaaactgcactctccatgtacattatagag
aacagttttccattatccatattaaactgtgagaagcggtctgaggaatccaacaaggat
accactgccaagattgaggctgagcttgatgcttcttcaactgggactgagcatccctcc
tcttcagaagctgcatcctctctggaacactcacttgatacacttttgttgctttgttgt
gaaaattccttgcgcttgtactcgatgaagtctgtgattcagggcaaggataaaacaatt
cataaagtaaaccatacgagaccttgctgttggaccaccacttttaagaaagatggaaga
gtttgtggacttctattgctgtttcaaacaggggatatggagatcagatccttgccagac
ttggaattggttaaagaaagctccataaagtcaatactaaggtggaactacaaggcaaat
atggataagttgatgacttctgataatgctcaagttgcactgacgagcggatgtgaaatg
gcattcatctctctcttggctggtgcaaatgatttcaggattccggaatctctgccttgt
ctccacgatagggttcttgcggcagctgccgatgctgccttaagtttctcttcaaaccag
aagaagaaacagggtatggcaccagggattcttggtggtatagtcaaaggctttaaagga
ggaaaagtgaatacatctgcaatgcctgaatccaattttactcatttggagagcaaattt
tcaaagaccccattcatagacacaagccagaatgttaataagcatgaagagatggagctt
gacatagatgacatcgaaatagatgacactccacctgtaactagctcctcatctcatgaa
gctgttcaaacgaaaggaggaaaagaaacagacagggaaaaactgctaggtgcagcagat
gattcaacacccagggttagaacagctcaagaaattattgcaaaatatagaaaagctggg
gacgcctcttcagcagcagcgcatgcgagaaataaactggtagaaagacgggaaaagctg
gagagaatcaacagacgcaccgaagagctgcaaagcggggcagaaaactttgcgtcattg
gcagatgaactggtgaaggcaatggaaaatcgaaagtggtggcaaatataa
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