Gossypium raimondii: 105780097
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Entry
105780097 CDS
T04129
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
gra
Gossypium raimondii
Pathway
gra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105780097
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gra01001
]
105780097
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105780097
03029 Mitochondrial biogenesis [BR:
gra03029
]
105780097
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105780097
Protein kinases [BR:
gra01001
]
Serine/threonine kinases: Other
ULK family [OT]
105780097
Membrane trafficking [BR:
gra04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
105780097
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105780097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
ATG1-like_MIT2
YrbL-PhoP_reg
APH
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
105780097
NCBI-ProteinID:
XP_012459669
UniProt:
A0A0D2V4V1
LinkDB
All DBs
Position
4:complement(11207741..11213793)
Genome browser
AA seq
721 aa
AA seq
DB search
MAQPTGRGRVVGDYLVGRQIGSGSFSIVWHARHRVHGTEVAIKEIVTSRLNKKLQDSLMS
EIFILKRINHPNIIRLHDIIEVPGKIHLVLEYCKGGDLSMYVTRYGSVPEATAKHFMQQL
AAGLLVLRDNNLIHRDLKPQNLLLSTNDSNAVLKIADFGFARSLQPRGLAETLCGSPLYM
APEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNILKSTELHFPVENDYL
TADCKDLCQKLLRRNPVERLTFEEFFNHPFLSEGQPDKSLRSQRFPRAGFPLSESGAVRN
TEESFQEDCLPFFLDDDSSGPDGSPSFAKKRSLMKSAYGFSADAKDAREATSSPVNRVDF
TSKYSGARQKLKDASFRLESCKVSSEALHEPHKSMDQRSVNTRSRVAESLELIDQDYVLV
SGPPLDVSSSSVTSKPNHIPYKSENPPLIPFVNKTASTAPMPIIGPSNVKICHAGSLDSQ
SSAPGTSQGSMDIGDVLEQPSSHCLTRIKSLQHCASTITELVHEKIEAGRQLEAFSIQLV
ILAIWKQALHICHTQAASGTEGSPSREASRLGASRKHETSDTEECTNVVSPEGPEDISSE
IEREFLREVEHAEELAKVIEPGSTEMPDAMETIFQAALALGRHGGVEELMGDMESAALLY
SKAERLLVFLLVEAPSLILNPPFSLTNSDRYRLRTYIDFLRNRQGYSRSQMMALLKCKDQ
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaccaacagggaggggaagagtggtaggggactatttagtgggccggcaaatc
gggtcgggttcgttctcgattgtctggcatgcgaggcatcgagttcatggaacggaagtg
gcgataaaggagatcgtaacgagtcggttgaataagaagttgcaggatagtttgatgtca
gagatctttatcttgaagagaattaatcatcctaatattattcgactgcatgatattatt
gaggttcctggaaagatacatcttgtattggagtactgcaaggggggtgatctttctatg
tatgttacacgctatggaagtgtccctgaggcaactgcaaagcatttcatgcaacagcta
gcggcgggcctcctagttctccgtgacaataatcttatacatcgggatctaaagcctcag
aatcttcttctctcaacaaatgacagcaatgcagttttaaagattgcggactttggattt
gcaagatctctgcaacctagggggcttgctgaaacattatgtggttcacctctttacatg
gctccagagataatgcagctgcagaagtatgatgcaaaggcagatctttggagtgttggt
gctattttgtttcagcttgttactgggaaaactccattcactggaaacaatcaaatacaa
ttactccagaacattttgaaatcaactgagttgcatttccctgtggaaaatgattatttg
acagctgattgcaaagatttatgtcaaaaattgctgcgacgtaacccagtggaacgttta
acatttgaagagttcttcaaccacccatttctttctgagggccaacctgacaaatctttg
aggagtcagagatttccaagagctggttttcctctttctgaaagtggtgctgtgaggaat
actgaggaaagctttcaggaggactgtcttcctttctttctagatgatgattctagtggt
cctgatggtagcccttcctttgcgaaaaagaggtccttgatgaaatctgcttatggattt
tctgctgatgcaaaagatgctagagaagcaacatctagtcctgtgaatagagtagacttt
acatccaaatacagtggtgcaagacaaaaattgaaagatgctagtttcaggcttgaaagc
tgcaaggtgtcaagtgaagctctgcacgaacctcacaaatccatggatcaaagatctgtg
aatactcgttcaagagttgcagagtcactggagttgattgaccaagattatgttcttgtg
tctggacctcccttggatgtgtcatcttcttcagttacttccaagccaaatcatattcca
tacaaatctgagaatcctcctctaattccctttgtcaataaaactgcatcaactgccccc
atgccaattattggtccctccaatgtcaaaatctgtcatgcaggaagcttggacagtcag
agttctgcccctgggacttctcaaggatccatggatattggagatgttctggaacagccg
tcatctcattgcttgactaggataaagtcattacagcattgtgcatctacaattacagaa
ttagtgcatgaaaagattgaggcaggtaggcaactggaagcattctcaatccagcttgtg
attcttgcaatttggaagcaagcattgcatatttgccacacccaggctgcatcgggtaca
gaaggaagtccaagccgagaggcaagcagattgggtgccagcaggaaacatgaaacatct
gatacggaagaatgtacgaatgttgtcagcccagaagggccagaggatatatcctcagag
atagaaagggaatttctccgggaagttgagcatgctgaggaacttgccaaggttattgag
cctggaagtacagagatgcctgatgcaatggagacaatatttcaagccgcccttgccttg
ggaagacatggaggagttgaagagctcatgggtgatatggaaagtgcagctttattgtat
tcaaaggctgagcgtttattagtcttccttctagtggaagcaccatctctcattctgaat
cctccattttcccttacaaactcagatcggtatagactccgaacttacattgattttctt
cgaaacaggcaaggttactcgagatcacagatgatggctcttctcaagtgcaaggatcag
ccatag
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integrated database retrieval system
