Gossypium raimondii: 105780137
Help
Entry
105780137 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105780137 isoform X1
KO
K05289
GPI-anchor transamidase subunit GAA1
Organism
gra
Gossypium raimondii
Pathway
gra00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
105780137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gaa1
Motif
Other DBs
NCBI-GeneID:
105780137
NCBI-ProteinID:
XP_012459727
UniProt:
A0A0D2RYU2
LinkDB
All DBs
Position
4:41454044..41458615
Genome browser
AA seq
719 aa
AA seq
DB search
MAETKEKSLSDEKPKPRVRPIVRLGIFLISHSFHVSVVCCTAGVLALFLLPVLAKNTYIS
ENALMPGSASPMLSNQHVSDGNRLVKDLTNPNSKSSETGIESHKIIAQYMLDLGAEVSFH
KFHPQMNQFHPLHFFSSPDSGKIQENYSCSSYGINTVGIIRAPRGDGKEAIVLVTPYNAL
KSGFGEALSLGIAYSVFSLLTQVTWLAKDIIWLVADSQYGEYAAVAAWLREYQTPKFSSL
SAPNAEMCPDVNNLFELKGHSISGSKFSNSFRRAGTMAAALVLKVRDQNEQFEDTISIYA
EASNGQMPNLDLINVVNYLAVHRQGLRVNVEKLWSLLNSSWLKSLGEIFESLAKVAKSLY
PKWKFGIPATEYVEGTATLASSLYYQALGVPTGPHGAFRDYQVDAITLEISPKFSLDKVW
RNDILLRGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPSKFVSVGVYMIAFALLIAPLPM
VAASLYVDANSSSKRSKGDSSTPSAITDTDEHSIAIRSWRWLNSAKLVFIVHLWGAIVSL
LPYFISQIPDCSPTTSFMIWVLLSILSLLTLNSVLASPLACAKATQEKEWALVKSVTISS
VFIGLGLMSVINFATAEIGALLMVPMCLLAQPLKLDVRAGTLRSFCRMICNLVLGHIAFP
PAAFFLLKGMLDGFGNANVGDFWMWVESLWAWNSATYLFIGMVQLPCWVLCISILFHTC
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaccaaagagaagagcctgagcgacgaaaaaccgaagccaagagtacgccca
attgttcgcctcgggatcttcctcatctctcacagcttccacgttagtgtcgtttgctgc
actgctggggttttggctctgtttctattgcctgttcttgctaaaaatacttacatctcc
gaaaatgccctcatgccaggttctgcgagtcccatgctttctaatcagcatgtttcggat
ggaaatagattggtgaaggatctaactaatccaaactcgaaatcttcagaaacaggaata
gaaagtcacaaaatcatagcacagtacatgttagacttgggtgctgaagttagtttccac
aaattccaccctcagatgaatcagtttcatcctttacactttttctctagccctgattcc
ggtaagatacaagagaattacagttgttcatcatacggtatcaatacggttgggattata
agagctcctcgtggtgatgggaaggaggctattgtcttggtaacaccttacaatgctcta
aagagtggatttggtgaggctttatctttaggcattgcatactcagtattttcgttgctc
actcaagttacctggctagccaaggatattatatggcttgttgctgattcgcaatatgga
gagtatgcagcggttgctgcttggttaagagaatatcagactcctaaatttagcagtctg
agtgctccaaatgctgagatgtgtccagatgttaataatctttttgagttgaaaggtcat
tctatttctggaagtaaattctccaatagttttagacgtgctgggactatggctgctgct
ctggtcttgaaggttagagatcaaaatgaacaatttgaagacactattagcatttatgcc
gaggcatctaatggacaaatgccaaacttggacctcatcaatgttgtgaattatttggca
gtgcataggcaaggtttacgtgtaaatgtggagaaattgtggtcccttcttaactccagt
tggcttaaaagtttgggggaaatctttgaatctctagcaaaagtagctaaaagcttatac
cccaagtggaaatttggtatccctgcaacagagtatgttgaaggcactgctacacttgca
agctcattgtattatcaggctctaggtgtgcctacaggcccacatggtgctttccgtgac
taccaagttgacgcaatcacgttggagatttcacctaaattttcattggacaaagtctgg
cgcaatgacattcttctaagaggcggccggttgattgaaggagttatacgatcagtaaat
aacctccttgagaagtttcaccaatcatttttcttgtacctcttaacatctcctagtaag
tttgtgtcagtaggggtttacatgattgcgtttgcacttctcatagcaccacttccaatg
gttgcggcttctctctatgtggatgcaaatagttcaagcaagcgttcaaaaggtgatagc
tcaactccatctgcaatcactgatactgatgaacacagtattgctatcagatcctggagg
tggcttaattcggctaaactagtttttattgttcacctatggggtgctattgtttcattg
cttccgtatttcatctcccaaatacctgattgcagcccaacaaccagcttcatgatctgg
gttttgctttcaatcctcagccttctaaccttgaactcagttctggcttctcctttagct
tgtgctaaagcaactcaagaaaaagaatgggctcttgtgaaatcggtgactatctcatcg
gtgttcattggattggggctcatgtcagtcattaattttgctaccgcagaaattggagct
ttattgatggtcccaatgtgtttactggctcaacctttaaagcttgatgttagagctggt
actctgagaagtttttgcaggatgatctgcaatctggttttagggcatattgcttttcca
ccggctgctttttttctgttgaaagggatgcttgatggttttggcaatgccaacgtgggt
gacttctggatgtgggttgagtctctttgggcatggaacagtgctacatatctctttatt
ggtatggtacagttgccatgctgggtcttatgcattagcattttgtttcatacttgttga
DBGET
integrated database retrieval system
