Gossypium raimondii: 105780266
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Entry
105780266 CDS
T04129
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105780266
04121 Ubiquitin system [BR:
gra04121
]
105780266
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105780266
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105780266
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105780266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
Anti-TRAP
Rad50_zn_hook
DUF7129
zf-HC5HC2H
Zn_ribbon_PF0610
Motif
Other DBs
NCBI-GeneID:
105780266
NCBI-ProteinID:
XP_012459945
UniProt:
A0A0D2S0W2
LinkDB
All DBs
Position
4:11856932..11858795
Genome browser
AA seq
369 aa
AA seq
DB search
MESIRSPYWCYRCNRFIRIRVRSPHDSLNCPDCGGGFIEEIETPSRSPIHHRFPVAAMYS
DTPSPALSPSPTATPHFRRTRRNAGDRSPFNPVVVLRGPTSESDGIVTERGNRNFELYYD
DGSGSGLRPLPASMSEFLMGSGFDRLLDQLSQLEANGVGRFEQPPASKAAIESMPVIKIL
GSHVRSESHCAVCKEPFELDSEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPTENNG
NNLVENEAVRDEEAVGLTIWRLPGGGFAVGRFTGGTRAAEREFPLVFTEMDGGFNNAGAA
PRRISWAPSGRRSQESRGLGRVFRSFVSFFGRFRSSSRSGSDSGFTRRSRSSSVFGRSSR
RDSDWDFED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgattagatcgccctattggtgctacagatgcaatcgattcatccggatccgg
gttcgatctccccatgattcgctcaactgccccgactgtggcggaggattcatcgaagaa
attgaaacaccctcgcgatctcccatccaccaccgtttccctgtcgctgccatgtattcc
gacacgccaagccctgcgctcagcccaagccccaccgccactcctcattttcgccgaact
cgtcggaacgctggcgatcgctcccctttcaatcccgttgtggtcctccgtggacccacc
tccgaatccgacggcatagttaccgaaagagggaacagaaatttcgagctttattacgat
gatggctctggctcgggtcttcgtcccttacctgctagcatgtcggagtttttaatgggt
tcgggttttgatcggcttcttgatcagttatctcaattagaagcaaacggagttggccgt
tttgagcaaccgcctgcttcgaaagcggcaattgaatcaatgcctgtgattaagatccta
gggagccacgtaaggtcggaatctcactgtgcagtctgtaaggagcctttcgagctggac
tccgaagcacgggaaatgccttgtaagcatatttaccattcggattgcattttaccttgg
ctttctattcgaaactcttgtcctgtttgtcgccatgaattgccaacagaaaataatgga
aataacttagtggaaaacgaggctgttagagatgaagaagctgtgggattaaccatatgg
aggttaccgggaggtggctttgcagtggggaggtttactggagggacgagagcagcggag
agggagtttccactagtgttcactgagatggatggtgggtttaataatgcgggtgctgct
cctagaagaatttcgtgggcgcctagtgggagaaggtcacaagagagtagaggtttaggg
cgtgtttttcggagttttgtttctttctttgggaggtttaggagttcgtcacgttcaggt
tcagattctggatttacaaggagaagtagatcgagttcagtgttcggtagatcatcgaga
agggatagcgactgggatttcgaggattga
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integrated database retrieval system
