Gossypium raimondii: 105780352
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Entry
105780352 CDS
T04129
Name
(RefSeq) CSC1-like protein HYP1
KO
K21989
calcium permeable stress-gated cation channel
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gra02000
]
105780352
Transporters [BR:
gra02000
]
Other transporters
Pores ion channels [TC:
1
]
105780352
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
105780352
NCBI-ProteinID:
XP_012460084
UniProt:
A0A0D2RY34
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Position
4:43933048..43938510
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AA seq
715 aa
AA seq
DB search
MILSALLTSVGINLGLCFLFFALYSILRNQPGNIPVYSPRLFSERKAQEEDEFNLERLLP
SPGWLKRAWQPSEDELLSITGLDAVVFMRIFIFCVRVFAFACVVGIFVLLPVNFSGDQLT
IDFSNLPNKTLESFSISNVNDGSNRLWIHFCAAYVFTVFVCCLLYYEYNYISLKRIDHFY
SSKPRSDQFTILVSGIPASAGSSFSQAVDNFFTEYHPSTYLSHTVVRRTSKIQSLVNDAE
KLYRTLGRLKSTNSRQRHKREGFLGLFGRKVDLVDHYERKLEDIEDNVRLEQSSLGGEEI
PAAFVSFKSRFGAAIALHIRQGINPTEWVTERAPEPKDIYWPFFSASFVKRWMFKIVVVV
AYIAVTILFLIPVVVVQGLTHLEQLETWLPFLKGVLSLTFVSNLITGYLPSLILQLFLSI
VPPIMILFSSMQGSISHSQIEKNACTKLLWFTVWNIFFANVLSGSALSMVNIFLEPKKIP
GLLGEVVPAQASFFIAYVVTSGWTSTTSELLRLFPLLYSFVQRLFMGKDDDKDDFEIPSI
PYHSEIPRILFFKLLGVTYFFLAPLILPFLLVYCCLGYIIYRNQFLNVYAPKFETGGKFW
PIVHNSTIFSLVLMHVIAIGIFGLKKLPLASSLTIPLPILTLVFNAYCRKRFLPIFKAYP
TECLIKKDRKDQDDPTMTEFLEKLATAYQDPAMTAARYSRNDNGRSSPLLLGVEV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatactctcagcccttttaacttctgttgggatcaatcttggtctttgctttttgttt
tttgcactatactcgatattgaggaaccagccaggtaatatccccgtatattcgcctcgg
ttgttcagtgaaagaaaagctcaggaagaggatgagttcaacttggaaagattgctacca
tcacctggttggttgaaaagggcatggcaaccatctgaggatgaattattgtcaattaca
ggcttggatgctgtagtgtttatgcgcatttttatcttctgtgttagagtgtttgccttt
gcctgtgtcgtcggaatctttgttcttctgccagttaatttttcgggcgaccaattaacc
attgatttctctaatttgccgaacaaaactctggagtcattcagtatttcaaatgtgaat
gatggttcaaacaggttatggattcacttttgtgctgcctatgttttcaccgtgtttgta
tgctgtcttctgtattacgagtacaactatatttcgttgaaaagaattgaccatttctat
tcttctaaacctcggtcagatcagtttacgatattagttagcggtattcctgcctcagct
ggaagcagcttcagtcaagctgttgacaactttttcacggagtatcatccttcaacttat
ctttcacatacagtggttcgccgaacaagcaagattcaaagtcttgtgaatgatgcagag
aagctatatagaacacttggtcgtttaaaatcgacaaactctcggcaaaggcataagcgt
gaaggatttttgggactatttggtcgaaaagttgatcttgtagatcactatgagaggaag
ttggaagatatagaagataatgtgagactcgagcaatcatcattgggaggagaggaaata
cccgctgcttttgtgtcatttaagtcgagatttggtgctgcaatagctttgcacatccga
caagggattaatcctacggaatgggttactgaacgagctcccgagcctaaagatatttac
tggcctttcttttctgcatcgtttgtgaaaagatggatgtttaagattgtggttgttgtt
gcatatattgctgttacaattttatttcttattccagttgtagtcgtgcaaggtctcact
catctcgagcagctagagacctggctcccctttctaaaaggagtactaagcctgactttc
gtcagtaatttgattacgggatatctaccaagtctcattcttcaattgttcctatcgatt
gtaccaccaattatgatactcttttcttccatgcaaggatctatttcccacagtcagata
gagaaaaatgcgtgtaccaagctattatggttcaccgtgtggaacattttcttcgctaac
gtactatcaggttctgctctctctatggtcaatatcttccttgagccaaagaaaatcccc
ggactgctaggcgaagttgttcctgcacaggcatcattcttcattgcctatgttgtgaca
tctggatggaccagtacaacttccgaacttcttcgtctgtttccccttctttacagtttc
gtgcaaagactatttatggggaaagatgatgacaaagatgattttgaaattccttcaatc
ccttaccacagtgaaattcccaggattctcttcttcaaacttcttggtgttacttatttc
ttccttgccccactaattttgccatttctcttggtttattgttgcctgggatacattatc
taccgcaaccagttcttgaatgtatatgcacccaaattcgaaactggtggaaagttttgg
ccaattgtgcacaattcaacaatattttccttagtgctaatgcatgttattgcgatcgga
atatttgggcttaagaagcttcctctagcatccagtttaactatccctcttccgattctt
acgcttgtattcaacgcatactgccggaagaggttcctgcccatcttcaaagcttaccca
actgagtgtttgataaagaaagatagaaaagaccaggatgatccaaccatgacagaattt
ctcgaaaaattagcaactgcatatcaggatccagctatgacggcagcccgatattccaga
aatgacaatgggcgcagctctccccttcttctcggtgttgaagtttga
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