Gossypium raimondii: 105780402
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Entry
105780402 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105780402 isoform X2
KO
K19025
AP-5 complex subunit zeta-1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105780402
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
105780402
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
GCIP_C
Motif
Other DBs
NCBI-GeneID:
105780402
NCBI-ProteinID:
XP_012460170
UniProt:
A0A0D2R2N9
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Position
1:complement(8739303..8752067)
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AA seq
570 aa
AA seq
DB search
MSDRERDWDFYLRTVSNSARDSSFANDPASDPSLLHAVKKLCDFCRQEEKSSEDLVARVY
PHINKLFQRSTASLSQPTSPNGILLLVILQFFLDFGEVVLHDADPSLRTFFRSCLSREFA
DPVVAAATLDFLNVNKNKLLFSFPNLLPQFFPLLLKLIAWNGEKLEKAFLKVFPGLVSPG
SFLPLFPSLVDLPILVVALEKVERSSGSLIGSSIASIQKSAAPEMLLALMDEAYTGSTIG
DGGGDSESEESSTIDVADPVFLELLKDENDGLAERHWTSPGVAAVLQAATNSPQSDRLKQ
ILNITPRLLDMYFTIALRDANNSLICALIPILMARNSTLFPDKNYMYEVRRRLLEFMLAS
FQRSPDFIALLKKPIVDRLGEAYDSPEKTELALQLCWAVGEHGGGGGSHKDAARELFESL
ELLLYENLSSSRLGLRQESINSDSSNFRKSSQSRLLCFVITAIAKLATYHRELLPRARVA
LGKVARSRISDSRVWRRARDYLGLMDDPAICLSVLGPSRPSHGYPHNPGTVNWNDGGTKM
IAHIPFYILGEQEGPPFHDFSFPDILPRRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcgagaacgagattgggatttctatcttcgaaccgtatcgaacagtgcaaga
gactcgagtttcgctaacgatccagcctccgatccttctcttcttcacgccgtcaagaaa
ctctgcgatttttgtagacaagaagagaaatcctctgaggatttggtcgctagggtttat
cctcatatcaacaagctcttccaacgctctactgcttccctctctcaacctacctctccc
aacggaattctcttactggtcattcttcaatttttccttgattttggagaggtggttctc
catgatgctgaccctagtctgaggacatttttccgttcatgtttgagccgtgagttcgca
gatcctgttgttgcagctgcaactcttgattttctaaatgtaaacaagaacaaacttctt
ttttctttccccaacttactacctcagtttttccctttgcttctgaagctgattgcatgg
aacggagaaaaattagaaaaggcatttctcaaggtttttccaggattggtatcacctgga
tcatttctccccctatttccatctttagtagatttgccaatcttggttgtcgcattggaa
aaggtagaacgaagctcagggtcactaataggaagcagtatagcttctatccagaagagt
gcggctcctgagatgctacttgcactcatggatgaagcctatacgggttctaccattgga
gatggaggaggagactctgagtctgaggaaagcagtacgattgatgttgctgatcctgtg
tttctggaacttcttaaggatgaaaatgatggtcttgctgaacgccattggacttctcct
ggggttgctgcagtactacaagctgcaacaaatagccctcagtctgatagattaaagcag
atactcaatatcacacctcggcttcttgatatgtattttactatagctttgcgcgatgca
aataactcattaatctgtgcattaattcccattctgatggcaagaaattctacattattt
cctgacaagaactatatgtatgaggttcgtagaaggctcctagagttcatgcttgcttca
tttcagcgttctccagattttattgcacttttgaagaagcctatagttgacagacttggg
gaagcatatgacagcccagaaaagacagaattggcgttacaattgtgttgggctgtagga
gagcatggtgggggtggtggatctcacaaagatgcagctagggaactttttgaaagttta
gagctacttttgtatgaaaacctttcatctagtcgtctaggtctgaggcaggagtctatc
aactctgacagcagtaacttcagaaagtcatcacagtcgaggcttctgtgttttgttatc
acagctattgctaagcttgctacatatcaccgtgaactattgccgagggcacgtgtagcc
ttgggcaaggttgctcgatctcgaatatcagattcaagggtttggaggcgagctcgtgat
tatctgggattaatggatgaccctgctatctgtctgtctgtcttgggaccttccaggcct
tcacatgggtacccacacaatccaggcaccgtcaactggaatgatggaggcacaaaaatg
attgcgcatattccattttacattcttggtgagcaggaaggtccacccttccatgatttt
tcgtttccagatattcttccgagaagaagatag
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