Gossypium raimondii: 105780500
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Entry
105780500 CDS
T04129
Name
(RefSeq) mRNA export factor GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105780500
03015 mRNA surveillance pathway
105780500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105780500
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105780500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
105780500
NCBI-ProteinID:
XP_012460331
UniProt:
A0A0D2V7M9
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Position
4:1109087..1116500
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AA seq
641 aa
AA seq
DB search
MEAVKLEIRCPQIVNGIGLEPDPDWSFKSLLLELDSLEKKLNLSSSVSLPFAKTKSREIY
GEKGTKRSSNAFVMRVSDEEFEDSEGENEKVRDRGLVKAARFNCNEFYFSSSDDDSDDQP
CLDVQTYLMNEVGLVESALYELTHEHQLGVKEEIRNTISALETDLMNESEKSSSAHTKVE
KYREARREVERKFDVQYQRRVAEGLDNHLTAVQRDHELKSQIEERKIRSDAAHEEAKRRE
KALQEERLRQEKAKAEAELQAKLKAEEANRAALEAERIAAKEAAENEAAKSSKANTSEVP
QTEASGGPNATSSRVENDKTNKSELAGNMLRAAESALKLERERLQKLKELEEINQSLRSS
SNQNFDSTGRLIGRLIRQISGNKDKVSTQASELVKIFNNPRCPQTISIAYFAQKVVSNCE
SPSHSAFACAHVIVLVTSQFPQAMDLVLAEIHRACIYTVPKHISYTKSAFESKEAYWKVI
GYKEDDGKIESTTDYLVRLESYMKLYGALVQTEVAGCQNVHGLKEGWAWLARFLNALPAN
MYTAVALYAFLQMAGFALFRKYRSQFMKMLNFISENFLNALRSQDDPDLRPITSKIQCYL
EDKLFLQEPEGRTLHSSLLSNNMAPESDYHGPYHQQSRHFY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgttaagttggaaattcggtgtcctcaaatcgttaatggaatcggtcttgaa
cccgacccggattggagcttcaaatctttgttattggagcttgattccttggaaaagaag
ctcaatctctcttcttcggtttctttgccctttgcaaaaaccaaatcaagagaaatttat
ggggaaaaaggcaccaagagaagctcaaatgcatttgtaatgagagtatctgatgaggag
tttgaggatagtgaaggtgagaatgagaaagttcgtgatcgaggtttagtgaaagctgca
cgattcaattgcaatgaattttattttagtagtagcgatgatgattctgatgatcagcca
tgtcttgacgttcaaacctacttgatgaatgaggtgggattggtggagagtgctctatat
gagttaactcatgagcatcaacttggagttaaggaggaaattagaaacacaatctctgca
ttagagacagatttgatgaatgagagcgaaaagtcttcctctgcacatactaaagttgag
aaatatagagaagcaaggcgagaagtggagaggaaatttgatgttcagtaccaacgcaga
gttgcagaaggacttgataatcatttgactgctgtccagcgggaccatgaactcaaatca
caaatagaggaaaggaaaatacgaagtgatgcagcacatgaagaagccaagagaagggaa
aaggctcttcaggaagaaagactacgccaagaaaaggccaaagcagaggcagagttgcag
gctaaacttaaagctgaggaagcaaatagagctgctttggaagctgagaggatagcagca
aaagaagcagcagaaaatgaagcagctaaatcctcaaaagctaatacttctgaagtgcca
caaacagaagcttcaggaggcccaaatgctactagttcgagagttgagaatgataaaaca
aataaatcagaattggcaggtaatatgctcagggctgctgagagtgctttaaagctagag
agggaaaggctacaaaaattaaaagagttggaagaaataaaccaatcactgagatcaagt
tcaaatcagaattttgacagcactggaaggcttattggtagattaataaggcaaattagt
ggtaacaaggacaaggttagcacacaagctagtgagcttgtaaagattttcaacaatccg
cgttgccctcaaaccataagcatcgcatattttgctcagaaggttgtttctaactgcgaa
agccctagtcattctgcctttgcctgtgcacatgtcatcgtccttgtaacatcacagttt
ccacaagcgatggatcttgttcttgctgagatacatagagcttgcatttacactgtccca
aagcatatatcatacaccaagtcagcatttgaatccaaagaagcttattggaaggttatt
ggatacaaagaggatgatgggaagattgaaagtactacggattatttggtacggttggaa
tcttacatgaagctgtatggggcactggttcagactgaggttgctggttgccaaaatgtt
catggtctaaaggaaggttgggcttggcttgctaggtttctaaatgcactccctgccaat
atgtataccgctgtggctttgtacgcattcctgcaaatggcagggtttgctctcttcaga
aaataccgatctcagttcatgaaaatgctgaacttcatctcagagaactttctaaatgcc
ttgaggtcccaagatgatccggacctgaggccgattacgtccaagattcaatgttacttg
gaagacaagttattccttcaagaaccagagggaaggactttgcatagttctttgttatca
aataacatggcgccagagtcggattaccatggtccgtatcatcaacaaagtaggcatttc
tactaa
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