Gossypium raimondii: 105780613
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Entry
105780613 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105780613
KO
K08518
syntaxin-binding protein 5
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105780613
Membrane trafficking [BR:
gra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105780613
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
105780613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
PEP5_VPS11_N
Synaptobrevin
WDR55
WD40_Prp19
Beta-prop_IFT140_1st
TFIIIC_delta
CPSF_A
Motif
Other DBs
NCBI-GeneID:
105780613
NCBI-ProteinID:
XP_012460492
UniProt:
A0A0D2RZG0
LinkDB
All DBs
Position
4:38336418..38345200
Genome browser
AA seq
1104 aa
AA seq
DB search
MFAKIFHKHGISSHSKKPKKNDSEGSLMSANLNPRLTVHYGIPATASILACDLIQRLVAV
GTLDGRIKVIGGEYVEALLVSPKHIPFKNLEFLQNQGFLVSVSNENEIQVWDLGQRQIAS
SIKWESNITAFKAIHGTSYMYLGDEHGMVYVLKYDADQRKLTNLPYYVPTNVIAEEAGIS
SPNHPSVVGVLPQPCSQGNRVLIAYVNGLIVIWDVSDDKVVLVRGNKDLQLQGETASGSP
ENKNLEVSDCVSESDKVEKEISSLCWASNDGSILAVGYVDGDIMFWALPTATSKNNQQAS
KSHKNVVKLQLSSGEKRLPVIVLHWSDNQSHSARGCKIFFYGGDQIGSKETLTILDLECP
SGIESLKCVSHVDITPNGSFADMVLFPTVGEMENGGSLLFVLTNPGQLLVYDDACLAAFN
SQDEKKPCVSSGQYVMPIPIVAPCMTVSKLSLVDRDGEFSKALSKIVSTAKLKAPHTPIR
SSKKWPLTGGIPSRLPEAADYEVERVYMAGYQDGSVRMWDATYPALSLIFVLGAEIYGKV
PGIDIAGASAPVSALEICSFTQSVAIGNECGMVCLFKLTGTSNEMSLNIVTETEKKVHTL
HQADGPQCMALFSLFSSPVCLLQSTEFGNRLAVGLKCGRVAMLDVGTSSVLFITDSLSRS
NCSVSSLAMISFTDTNTLINNSKDSTSTNLNDGEKGLVFIMTRDAYLAVLDGRTGHMVSS
QSIPQKKESSAISMYILEGGNIVSSTVISESKNESAHSSTDPEIAPVEPKSETAAQVAYL
GQRSKSLLILLCFEDALHLHSLKSVIKGTCDSIREVNLKQCCWTSAIKIDDKECGLVLLC
RTGIIEIRSLTKLEVMGQCSLMTILRWNFTANMEKMACSSNRGQIVLINGCEFAAVSILA
LENDFRIPDSLPCFHDTVLAAAFDATVKSEDTSHGILGGIFKGLIGGKQDRNMQIKEACR
NDFPQLESIFSSPPFLKPSTASTDDKEVINLNIDDILIDEKITVFPKSETINNDEKNKRE
RLFEGSSTDAKPTVRSVYEIRAKYRGPEDAAAAAARARDRLIERQEKLERINDRSQELQN
EAENFASIAHQLARKMEKKKWWNI
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgttcgccaaaatcttccataaacatggcatctcctcacattctaaaaaacctaagaag
aatgattcagaaggaagcttgatgtcagcaaatttgaatccccgtttgaccgtacactat
ggaataccggcgacggcctcaattctggcgtgtgatctcatccaacgactcgtagcagtt
ggaacattggatgggaggattaaagtgatcggtggcgaatatgtagaagcgcttctagtg
tcacctaagcacatacctttcaaaaatttggagtttctacaaaatcaaggttttcttgtt
agcgtgtcaaacgaaaatgagattcaggtctgggatttgggacaaaggcagatagcttcc
agcataaagtgggagtcgaatataactgcttttaaagccattcatggcaccagctacatg
tatcttggagatgagcacggaatggtgtatgttttaaagtatgatgctgaccaacgcaag
cttaccaacctgccctattatgttcccacaaatgttatagctgaagaggctggaatttca
tcacctaatcatccttctgttgttggagttctcccccaaccttgttctcagggaaataga
gtactgattgcttacgtgaatgggttgattgtcatctgggatgtttctgatgataaagtt
gttctagttagaggcaataaggatcttcaattgcaaggtgaaacagcatctggttcccca
gaaaataaaaaccttgaggtttctgattgtgtatcagaaagtgataaagtggagaaagag
ataagctctctttgttgggcatctaatgacgggtcaattcttgcagttggttatgtagat
ggggatatcatgttttgggccctaccaactgctacctctaaaaataatcagcaagcttca
aaatctcacaaaaatgttgttaaactacaattatcatcaggagagaaacgacttccagtc
attgttttacattggtctgacaaccaatcccatagtgctcgtggttgcaagatttttttt
tatggaggtgatcaaattggatctaaagaaactctgacgatcttggaccttgaatgccct
tctggaatagaaagtctaaaatgtgtcagccacgtggacattacacctaatggctctttt
gcggatatggttttatttccaactgttggagagatggagaatggtggcagtttgttattt
gtgttgacaaatccagggcaattgcttgtttatgatgatgcatgcttggctgccttcaat
tcccaggatgagaaaaagccttgtgtttcttcaggacagtatgttatgccaatacccatt
gttgctccatgcatgactgtgagtaagcttagtttagttgacagagatggggaattttcg
aaggctctttccaagatagtatcaactgcaaagcttaaagcaccacatactccaattaga
tcgagtaaaaagtggcctttgactggtggtattcctagccgtcttcctgaagctgcagat
tatgaagttgaaagagtatatatggcaggttaccaggatggatctgttcgaatgtgggat
gctacctaccctgctctttcacttatctttgttttaggagctgagatatatggaaaggtt
ccaggcattgatattgctggtgcaagtgcaccagtttcagcattggaaatttgctccttc
actcaaagtgtagccattggcaatgaatgtggtatggtttgtctattcaagctaactgga
acttccaatgaaatgagtttgaacattgtgacagaaacggagaaaaaagtccataccttg
catcaagcagatggtcctcaatgcatggccttgttctcgctcttcagttctcctgtctgt
ttgcttcaatctacagaatttggtaatagactagcagtaggacttaagtgtggccgggtt
gcaatgcttgatgttggtacatcttcagtgttgttcattacagatagtttgtcacgctca
aactgctctgtcagttctttggctatgatatcctttacagataccaataccttaataaac
aactcaaaggattctacatccacaaatctgaatgatggcgaaaaggggttggtgttcata
atgaccagggacgcttacctagctgttttagatggcagaactggccatatggttagctct
cagtcaatacctcagaaaaaggagtcgagtgccatctccatgtacattttagagggtggc
aatatagtttcgtcaacagtgatcagtgaatctaaaaatgaatctgcacattctagtact
gaccctgaaattgctccagtggaacctaaatctgagactgctgctcaagtggcatatctt
gggcagagatcaaaaagtttactcatcttactttgttttgaggatgcactgcatttacat
tctttgaagtcagttattaaggggacctgtgactccatccgggaagtgaatcttaaacaa
tgttgttggacttcagccatcaagatagatgacaaagagtgtggattggttctgctttgc
aggactggaatcattgaaataaggtctttgacaaagcttgaagtgatgggacaatgttct
ttgatgactattcttagatggaacttcacagcaaacatggaaaagatggcatgttcttca
aatagagggcaaattgtactgataaatgggtgtgaatttgctgctgtatctattctggcc
cttgagaacgacttcaggattccggactctttgccttgttttcatgatacagtcctagca
gctgccttcgatgcaactgttaaaagtgaggatacgtcccatgggattttaggtggtatt
tttaagggcttaataggtggtaagcaggatagaaacatgcaaattaaagaagcttgcagg
aacgatttcccacaattggagagcatattttctagtcccccattcttaaagccttccacg
gccagcacggatgacaaagaagtcatcaatcttaacatagatgacatcctaattgatgag
aaaatcactgtcttccctaaatctgagacaatcaataatgacgagaaaaataaaagagaa
agactatttgagggttcaagtactgatgcaaaaccaacagtcagatcagtttacgagatc
agggccaagtatcgaggaccggaggatgctgcggctgcggctgcacgggcaagggaccgg
cttatagagcggcaggaaaagcttgagaggatcaatgaccggtcacaagagctacaaaac
gaggcagagaactttgcatccattgcacatcaacttgccaggaaaatggaaaagaaaaaa
tggtggaatatatga
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