Gossypium raimondii: 105780659
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Entry
105780659 CDS
T04129
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105780659
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
105780659
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
105780659
NCBI-ProteinID:
XP_012460570
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Position
4:375209..383494
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AA seq
642 aa
AA seq
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MAIDCLVLGAGQEVGKSCMVVSINGKRIMFDCGMHMGYTDSRRYPDFSLISKNGDFDNAL
TCVIVTHFHLDHIGALPYFTEVCGYKGPIYMTYPTKALAPLMLEDYRKNMDRRGEDEQFT
SDHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVIGAAMFYAKVGDAAMVYTGDYNMT
PDRHLGAAQIDRLQLDLLITESTYATTIRDSRYGREREFLKAVHNCVAAGGKVLIPTFAL
GRAQELCILLEDYWERMNLKVPIYFSAGLTIQANMYYKMLINWTSQKIKETYATHNAFDF
KNVRNFDRSLINAPGPCVLFATPGMIVGGFSLEVFMQWAPSENNLVTLPGYCVAGTIGHK
LMSGKPTKIDLDKDTQINVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHAILVHGEKPKMA
TLKERIQSELGIQCYCPANNETVTIPSTHYVKADASGTFIRSCLNPNFKFSTCSSTDKSY
LDSNKSKAVSRLSVSDDRATEGILVVEKGKKAKVIHQDEFLHMLGEKKHEIQFAYCFPMH
MARTEDLSSTSHMLCSFDKCTLISRLSMILSDELSEGNILDLGEELQVESFHVSVCSSDN
CPHRLSSSLQNGSESVFFCCHWSVADEKLAWKIISIMKNSTL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgattgcctcgtccttggggcaggccaagaagttgggaaaagctgcatggtg
gtctcgataaatggcaagcgaatcatgttcgactgcgggatgcatatgggatacactgat
tctcgccgatacccagatttctctctcatttctaagaatggagatttcgataatgctctc
acttgtgtcattgttactcactttcatttggatcatattggagcacttccttatttcact
gaagtttgcggttataagggtccaatttacatgacttatccgacaaaagcattggccccg
ttgatgttggaggactacagaaagaatatggaccgaaggggcgaggacgaacagtttact
tctgatcatattgcagaatgcatgaaaaaggttataccagtggatttgaagcagaccgtg
caggttgataaagatcttcaaatccgtgcctactatgcaggacatgttattggggcagca
atgttttatgcgaaggtgggagatgctgctatggtgtacacaggagattataatatgacg
ccagatagacatcttggggcagctcagattgatagactacagttggatcttctcataaca
gagtctacttatgcaacaaccatacgtgattcaagatatgggcgagaaagggagttcctt
aaagctgttcataattgtgttgctgctggaggaaaagtgcttattcctacttttgctcta
ggaagagctcaggaactttgtatattgttggaagattactgggaacggatgaatctaaaa
gttcctatctacttctcagcaggtttgacaatccaagccaatatgtattataaaatgctt
attaactggacgagccagaagatcaaggagacgtacgccacacataatgcatttgatttt
aaaaatgttcggaattttgaccgttctttgataaatgctcctggaccttgtgttctcttt
gctacacctggtatgattgttggtggcttttcactcgaggtttttatgcagtgggcgcct
tcggaaaacaatctcgtgacattgcctgggtattgtgtggccggaaccataggccataag
ttaatgtctggtaaaccgaccaaaattgatttggacaaggacactcaaatcaatgtgcga
tgccagattcatcagctatctttcagtcctcataccgacgccaagggtattatggatctt
gtcaaatttctctcacccaaacatgctatacttgtacatggtgagaagccgaaaatggcc
actcttaaagaaaggattcagtctgaacttgggatccagtgttattgtccagcaaacaat
gaaacagtcaccattccttcgacacactatgtgaaagcagatgcttcaggtacctttatc
cgaagttgcttgaacccaaacttcaagttctcaacatgtagttcaaccgataaatcttat
ttggattcaaacaaatcaaaggccgtttcaaggctttctgtaagtgatgatagagctaca
gaaggtatcttagtagtcgaaaaaggcaaaaaggcaaaagttatacaccaagatgaattt
ctacatatgttgggagaaaaaaagcatgagattcagtttgcttattgtttcccgatgcat
atggcccgaaccgaagacctctcttccacttcccatatgctctgcagttttgacaaatgc
actttgattagtcgattatcaatgatactatcagatgaactttccgaaggtaacatactg
gatttaggggaagaacttcaagtagaatcattccatgtatccgtttgttcgtcagataat
tgtcctcatagattatctagtagtcttcagaatggttcggaatcagtgttcttttgttgt
cattggtcagtggctgatgaaaaacttgcatggaaaatcatttcaatcatgaaaaattct
actttataa
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