Gossypium raimondii: 105780770
Help
Entry
105780770 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105780770
KO
K12589
exosome complex component RRP42
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105780770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105780770
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105780770
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
105780770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Spore_YtfJ
Motif
Other DBs
NCBI-GeneID:
105780770
NCBI-ProteinID:
XP_012460719
UniProt:
A0A0D2UZY2
LinkDB
All DBs
Position
4:complement(50002020..50004705)
Genome browser
AA seq
287 aa
AA seq
DB search
MVGLSVGEKHFIQGGIAQDLRSDGRKRLTYRPIYVETGVIPQAHGSARVRLGATDVIASV
KAELGKPSALQPDKGNIAIYVDCSPTAAPMFEGRGGEELSTELSVALQRCLLGGKSGAGA
GIDPTSLVVVEGKVCWDLYIDGLVISSDGNLLDALAAAIKAALSNTGIPKVDVAADATSD
EQPEVNISDEEFLQFDTSGIPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRKGHIC
GLMKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEIAAAEASEEES
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtgggactttctgttggagaaaagcatttcatacaaggtggaattgctcaagacctt
cgttcagatggtcgaaaaaggctaacttaccgacccatatatgttgaaactggagttatt
cctcaggcacatgggtcggctagagttaggcttggtgcaactgatgttattgccagtgtc
aaggctgaacttggaaaaccaagtgcattgcaacctgacaaagggaacattgctatatat
gttgattgtagtccaactgcggcaccaatgtttgagggtagagggggtgaggagttgtca
actgagctatcggttgccttgcaacggtgcctcttgggtggtaaaagtggagcaggagct
ggaattgatcccacatctctggtggttgtggaaggaaaagtgtgttgggatctctatatt
gatggtctcgttattagttcagatgggaatttgctagatgcccttgctgctgccattaag
gctgctttaagcaatactggcatccctaaggtcgatgttgcagcagatgcaacaagtgat
gaacaacctgaagtcaacattagtgatgaagagtttctacagtttgacacatctggaatc
cctgtcattgttactctaacaaaggtggggaggcactatatcgttgatgctacatcggaa
gaggaatcacaaatgagctcggctgtttcgatttctgttaaccgaaaaggacacatttgt
gggcttatgaaacgtgggggtgtcggcctagacccgagtattattcttgacatgatttct
gtagcaaaacatgtaagtgaacagctaataaacaagttggattctgagattgctgctgct
gaggcaagtgaagaggaatcatga
DBGET
integrated database retrieval system
